NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300029095

3300029095: Human fecal microbial communities from mother in Denmark - 181_M



Overview

Basic Information
IMG/M Taxon OID3300029095 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0127429 | Gp0193538 | Ga0169229
Sample NameHuman fecal microbial communities from mother in Denmark - 181_M
Sequencing StatusPermanent Draft
Sequencing CenterBeijing Genomics Institute (BGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size155347311
Sequencing Scaffolds26
Novel Protein Genes31
Associated Families31

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available9
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae3
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis1
All Organisms → Viruses → Predicted Viral1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameHuman Host-Associated Microbial Communities From Fecal Samples Of Mother And Infant In Denmark
TypeHost-Associated
TaxonomyHost-Associated → Human → Digestive System → Large Intestine → Fecal → Human Host-Associated → Human Host-Associated Microbial Communities From Fecal Samples Of Mother And Infant In Denmark

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Host-associated → Animal → Animal distal gut

Location Information
LocationDenmark
CoordinatesLat. (o)55.676097Long. (o)12.568337Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F032312Metagenome / Metatranscriptome180N
F044554Metagenome154N
F044555Metagenome / Metatranscriptome154N
F050794Metagenome145N
F052660Metagenome142N
F056682Metagenome137Y
F057001Metagenome137Y
F064725Metagenome128N
F064817Metagenome128N
F068811Metagenome124N
F068855Metagenome124N
F071325Metagenome122N
F074899Metagenome / Metatranscriptome119N
F074964Metagenome119N
F075481Metagenome119N
F076189Metagenome118N
F076653Metagenome118N
F077313Metagenome117N
F078693Metagenome116N
F083451Metagenome113N
F087336Metagenome110N
F088920Metagenome109Y
F089590Metagenome109N
F089591Metagenome109N
F090484Metagenome108N
F090513Metagenome108N
F093883Metagenome106N
F094005Metagenome / Metatranscriptome106N
F098313Metagenome104N
F099451Metagenome103N
F106193Metagenome100N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0169229_100065Not Available84669Open in IMG/M
Ga0169229_100581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales26200Open in IMG/M
Ga0169229_100775All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae21753Open in IMG/M
Ga0169229_101652Not Available12873Open in IMG/M
Ga0169229_101681All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae12741Open in IMG/M
Ga0169229_101986Not Available11272Open in IMG/M
Ga0169229_103154All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes7356Open in IMG/M
Ga0169229_103240Not Available7186Open in IMG/M
Ga0169229_103416Not Available6814Open in IMG/M
Ga0169229_103583All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales6453Open in IMG/M
Ga0169229_103896Not Available5958Open in IMG/M
Ga0169229_103946All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium5866Open in IMG/M
Ga0169229_104101Not Available5664Open in IMG/M
Ga0169229_107394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis3256Open in IMG/M
Ga0169229_108380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae2921Open in IMG/M
Ga0169229_109875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales2525Open in IMG/M
Ga0169229_113059All Organisms → Viruses → Predicted Viral1984Open in IMG/M
Ga0169229_114189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii1852Open in IMG/M
Ga0169229_116404All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium1640Open in IMG/M
Ga0169229_116894Not Available1602Open in IMG/M
Ga0169229_116917Not Available1600Open in IMG/M
Ga0169229_119663All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium1412Open in IMG/M
Ga0169229_119775All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1405Open in IMG/M
Ga0169229_121649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales1305Open in IMG/M
Ga0169229_122684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii1254Open in IMG/M
Ga0169229_136672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae819Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0169229_100065Ga0169229_10006579F094005MKKEIVKLKEGNSVIYQDKTLMEKANVVSIDKKNGTAILSNKVIITRTTNLEGQFTRLDGKGNAIILPCTPENEQKYNAFVAYHQSKKSLEAIKKWLDDNGKHKDDETFEKVITLDKKLKKLIEKLNE
Ga0169229_100065Ga0169229_10006580F032312MARIKDYDEDLSAPKLLRERARDSKGRFIKKDLPPYLGAEQVLKPKNYYHFDSHGNYKGSSMNFDAMVLLGFTWFKLLGVALMMLLWPIVFIYALNDGIERYPFKKYAIPYIFILVVWFIVFLYGLVS
Ga0169229_100065Ga0169229_10006587F044555MKTKITINQNGNQILSCEVCKDIHNISFMSNEGILELISGLNYMGNLPTVPDLEKPIEIQITVLREIPLEQNKRVQTKIKEIIYNNLYDTLVEELKDTISRFKAQYNIQEINPYISDILQNPEDLYR
Ga0169229_100065Ga0169229_10006593F064817MNIKNLFNRFRKQEPELSYSLNLIYLKDNKVVFNPNIQCAKDLENYLSDYMRLFGMYSDKPYVLIYQEYKNRYWVYDKEPYLLYYKVPLIVNLSRKLSGKSDMVITKEKYQAAKDLVPAHEVSDRFKIPEYITGVFTDIWYKCQGYMDTDHANLEDILELMHHNWLKEFESFVFKRNYDTDMLFLNHSLTYILDQAEEEGRRICIQNIIERNINQENQDENETI
Ga0169229_100581Ga0169229_10058115F074899MSGRKQWNKQAATSSFLDKKTPQSLIQQGLEGSTVVGKDEVGSSNLPSSSI
Ga0169229_100775Ga0169229_10077519F068855VEVQVPQARKTLALQGLQAEKENENANVQNAGWLHSFDADYHYRGSDLHYHVNVSAALSDGGAVW
Ga0169229_101652Ga0169229_1016522F098313MKEKEFDFVIYPLKLIITIGLDYKTLCDRFENAELDHEGEWGDEGDLDSEVSFMNLVRDKGDDRAFKLLWNFQSENDMTIQNICHESFHAAMSVCQHCNMSLGFKVGEDEHAAYIAGFVGNCAGEMFGFLEEEKDGKEE
Ga0169229_101681Ga0169229_1016816F087336VAELEQVPKAFRAAGNQRRAAAKERIKDDAIGHGRVSDRILAEIEDNHMRERDTKIGLVEQRQVAFLEIAFQILPLKSKQKRAP
Ga0169229_101986Ga0169229_1019868F090484MDIPKNPSDFFLLQIMKLQLGRNINISLRLLEQWSDDSLFMELYALYCMIKISRRDSRIRFKNKKDLLHKLGIGYSKFKNMTGHPMFDELFRMTNSTFVARRYRVNGVQLTLGCGKVNIPKNRILIKIKKNEITNHEKVLDRIREAMFVNLVRNNESVLNSGETNSQAEFVEGSHSYYGLIDSTISNKTIALYLNVGLTKAKEIVGMAIQDKLVKRFENIQFITYVDNPRAYIEANEHNYPIGKLIPVYRHGAVFWQIANTWTLYKKGATNRWYFGEKDIEKGEKEKVSKKDDFNFFLKDNTHILRFLNAEEVVSEDGEILGIDRKKTKEEEARSLASVMAKEAHKDFWDGYERSTQNQIIRKYYRAIIAEDKKRRMDMFLNRLKQSYDKVSGWSKEKVATVKAGMADAEACCAEVGTSVAGVCGRVSRRMKSYNNTDTDKKAGFNEVRDMYAEFAGEMAKAVGSVSEDIYTYVKAEQFKEKIGNMDISIQSLPNISITVDNDKELDGESIFKDIPFEELSFYNDTYLYPSSQYSSL
Ga0169229_102670Ga0169229_1026701F089591MTIQEAYLRSLQKNEQNLANGGIKLDPGRFVLLFNEAQDRLVKYYLNRKDDETIRSIQNLLVYWMSLDNAGRMDDPESTSFNLPDDYLWFSNIKGVFSYKGCEATDFVMWEAKNENIHELLGDENNRPSYDYRETFYSIGNGKVVVYESGFRTEEVKMTYYRRPVRVDLSGYINAAGIQSTDIDPELPDYLVEEILDMVAKQFNLNENELYRYRMDKDNVASFK
Ga0169229_103154Ga0169229_1031549F074964MITKKNVNKLQNAVIKENASNLVGAVKLYNALFANGADLKAICKMLEIPTEYAVKVATLAKDKKRLVAVCSQMLPKVDDIFVKFTLYSKVYKDTNADKEKGVEAKTADWCAENVVYGGEYKAFGFTTAESLETKKSTKWLIKENDEYKATYVAVKIKSYSIRTVAKCVSEYLAHESTQQ
Ga0169229_103240Ga0169229_10324015F099451MEIKNVGQLRKIIENLSDDYEIEMRVRRKLSDEELKECRYPYPYDTEYLTLEFDDIGVSDKVLCFGVTSKIN
Ga0169229_103416Ga0169229_1034163F077313MSKYVIKRKIPKYQEAGEVGSYMLGNMDGIQGLGIEPLVNTNQGLPAPVNPLGIYSLDTPDQLRTKYANAFDQDNVFPASFKGSLQRIAENYQDNGITLNNITVNDVDKSKTGSGETDVFDFTTIPYYGADDIGSRFTQMGRGIGRMRSEGYGDLSTGAKTANTITTIASGISGIMGLARNVVSGIASEKGTRTNIRLAQEREARQRRQSQMQYKDGGGVYLGPNNRFDSGSLTGEYLYPLPKSMEDQANVEVEKGEYVTQPGEAPMEAMGQKHADGGTPVSLEQGTKVITDDTTIEPDFAKYIRDTYGIKATPKDTYATLMDRYKAKIGLKSAYDDQKKALEKLKKNDKIDDENTRRLNASVLSKAINDSNDTVNGLEGRFTDFANVIYKEQEDRKMKKDEDTYFAKGGEIDNIISRSMKEYGLTEEDIAEAKKELLKKVAGIRQKMEIGGTSLFGRKLTFRPIENRFNNDPNYFGYQRQGTDGSYGGINTDERLNYYKTFNPVAYDAYMGASEGARARALQDAIYGQTSSWMGLATAENPIIANAEALRDYTTLVSFGGEDSQGNYPEDKKAAYHDRMRDNKLGLFTTSRPMIGLDVVTEEQHKALNDAGITHFSQLFSDKNKDVVNKILGEDMLKMQALRSMKGMEGLDFILDPHKVAPGPMDIGDVEEPDVKLDMPELIDPNTLPKTNTNAGKSNSGNGGRNIVGGGLDFPEVFRMTPGAVTTEGLERHYAPTVDPVLRSADQYMVETNRAFQSQLDQMGNVPDSQRGALSSNLQAIMSSNIGKYINEVEQGNVAQRTWADNVNARTWTDTYDKNIAQRQGYQSRILQALANTDENWARYFDSVNDEIQQKWNTATTMNTLRSIFGDVKIGPNGQLIADPQGDILSYRRLYPAQEVTKSKKG
Ga0169229_103583Ga0169229_1035831F071325LSDSSIIISKVVLFVKHFFDIFLNLPNAFLKAFHPHAVRFPAAFLLVHRFYLAFEELLSCATAYL
Ga0169229_103896Ga0169229_1038964F050794MQDLRIQRVKVLMMLYTSHYFVNNRQRQLLDHTYSLSRDQAFDYMTEFNKRLSDKVGIECTMDILLPTDDDNANIIIEYNGIIKKLMREAEKLELDTDAIKAMMRDLLDELKDDIDLNILIFDVTQLLIKYNLFRLDAITEQEFKNSFVRMDSRNMEIKKLTLSDIKKVVEMIEDRYSYALYMTEEYG
Ga0169229_103946Ga0169229_1039468F106193VGCNTCKEKALKAERERIERSMMNHSSSTAVSDMEYASRSTAGCMVMQDPLQTMERDVVSIYKQVRTKGDGVGVSYLNMQKKIREWIKNLPYGCPPDEEVQEMRKEILDGRAIYIKP
Ga0169229_104101Ga0169229_1041013F093883MIIMRNMEDKDIKTEIRDYLKEEADTHIRHWIAIKRESKRLYSDIEDRTKKIALKSFSLIKEDDFVVLHEMTHKIQMLNIEAVKVNSRLMFIIQLATSFGMDLDLDTTYASTAKSIIEDRTSGFVFYDDKERLRYADKELEDMFHDMSVTEVSKIGVVQSYKLLMKQYNEFKDMKANATGKTKADE
Ga0169229_107394Ga0169229_1073942F044554VLAGRFIPVLCASIARLFPCRTEIARCLTLDFAISRYLFLSFPFFFRTNFAQALFSSLLFVSDTRAKSILFLLFENEIAHLQGQYRFNSHRYCFSAFLVL
Ga0169229_108380Ga0169229_1083804F090513MEWKLLHIKHILYMQPFGALKIVPQSVGNKNGTKAVLQGWAAAFVPYMLSFTY
Ga0169229_109875Ga0169229_1098753F088920VSANLHHYPAFEAGLILHLILHFSQKAAIFAPKRAFSFLFVPTLFFVGLSVLSPQTSLKISGQASLY
Ga0169229_113059Ga0169229_1130593F083451IMDKNEREKQVLDLLMSRKDIRKLVEKSNECYSKMDFVGAMKYRQEIKDIVDRESKIMLTKSESLIGLMNNADNEYKFNMLVWLHSMMCMADVFNGILEDFKDGVRKANGNSKFVKFDNLDRLMAECKKEIDYLMKGTSKSFQISFAVRSDELREMIENMVGDNIREGYDMFKEEAKMTKETDRSKIEEFNKKLDHDQM
Ga0169229_114189Ga0169229_1141893F068811MDQDGSEHNICSNREGLCPGKEQHGASGWKKIFQHGKEPLRNKDSVSQYCNKKVAVSLILNENVSETLCIFSIDKTNGCRI
Ga0169229_116404Ga0169229_1164041F057001MPIQVPRARANLMTGKDLNKVQNEVKKASEKTLTGAVKAWCQLFKSGKEINEILKDNDIKVDKAIVPALVALAKDKEVVIQLCKEILPRVDETFCAYKEIERVYLDKQDQDKNTKLPENKVADMAITGKAHKRFGYNEPIEYEGGVYYEVFNGSDKRIVKCAVPIKRYTYNLIAKCITYYLTHPKNGK
Ga0169229_116894Ga0169229_1168942F064725MTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAVVKTSNKQAVLPSDFFDMLDAYRCEPLVCEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITEKIYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYDWDNYDITISGNTMYTGFDGFIYIIYRATPKDDDGLPYIPETALGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSYERMWPNAFDKYIKFI
Ga0169229_116917Ga0169229_1169171F075481MIRLRISLKAVFCLGLSLFLSSCGSRRQVSDTSIDNRLISRIETMIDEVIDRKIVEIRTSDLNADIVITERKFDTTKEVDPSTGERPVSSQTDAHIVIGRRDSTVMVDSLGIDKTITGIEDIDKKTDIEHKDVDDKKESRWPIAVTSISVLLILLGLIYLLKKMKVL
Ga0169229_116917Ga0169229_1169172F089590VEXXXXXXYGASCWAYFQPVHHLLTVLLIVLIANFLARLAQSIRGWKLRRSRRRRFSFKRWLREVRFTDILKEFALSCFIVMTLCVIYKTLYPIEEEASMILTVTKYGVYIALVGYVMLFLNTIGDAFADAYLVKVFKAVFKRINVFKMFGFSKNIPDEMFDDIKKIADDKVKDKS
Ga0169229_119663Ga0169229_1196631F076653MTLSDKYFGWKDIFFDRFVHCCNEKSGQPQGSNIPLAKINFDNKTGYVEDGTINIAELLQYLWINNKVYRCEYAPIDISSALQTLIRLTENAKHMFEDQPGVYDMISYRGFFLRDDFSSGKDYSLDLDKIVSGMGGWYGEDEDPCYSMFVSQDQIWNLNPILKVLADEGSILAKELGYDMNSYVSDNGYTIYNPYLSWINHYYHYCPTFNEDKLKPWDRVEDRKNKFKMTDKVKRGANNWYYSGGTISCVDNFLGKKYRKNLRTFIYRGIVFFLDRIWHTPLFERMGVKMKYNAYYCYAATSGIWYDKGFKRRLAKRFNKSLGGDGELFGANLACMVCDRKDIDWEALRLWLDKYDDPTDKGMVNSPIQFM
Ga0169229_119775Ga0169229_1197753F056682MKMQSRAGKVANHSIGQDKMYPASFGTFPLKNRSTFPIQKLGKIHENQEVL
Ga0169229_121649Ga0169229_1216492F076189VLSAGHCFFLSPFIKPLLYVEKLQIGTVLPVVSDLYREFAELSAYFDLYAIQSAQKQLRMLCNFHENTFGLLIFYANYAIL
Ga0169229_122684Ga0169229_1226841F078693VRGAERFFIKANCSLLLAKENQKTTSDFDALDPRERGCSPLSDPEGVVETEKS
Ga0169229_136672Ga0169229_1366723F052660PEKIGQERAGTEWTVVKSKIRLCVRNRSYGRFFYGGILMGIALPIPSHRAKSHNFACWWPAAAGHSRSADALPGKSNS

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