Sample 3300026856

Overview

Basic Information
IMG/M Taxon OID	3300026856 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114663 \| Gp0127627 \| Ga0209852
Sample Name	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_40_50 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	42821247
Sequencing Scaffolds	22
Novel Protein Genes	24
Associated Families	24

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	5
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1
Not Available	4
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus asaccharovorans	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Bacteria → Nitrospirae	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → unclassified Candidatus Nitrosotenuis → Candidatus Nitrosotenuis sp.	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1
All Organisms → cellular organisms → Bacteria → Acidobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Groundwater Microbial Communities From The Columbia River, Washington, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand → Groundwater Microbial Communities From The Columbia River, Washington, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river bed → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline)

Location Information
Location	USA: Columbia River, Washington
Coordinates	Lat. (^o)	46.372	Long. (^o)	-119.272	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000402	Metagenome / Metatranscriptome	1180	Y
F000545	Metagenome / Metatranscriptome	1038	Y
F002241	Metagenome / Metatranscriptome	579	Y
F003507	Metagenome / Metatranscriptome	482	Y
F004115	Metagenome / Metatranscriptome	452	Y
F005974	Metagenome / Metatranscriptome	384	Y
F007188	Metagenome / Metatranscriptome	356	Y
F007370	Metagenome / Metatranscriptome	352	Y
F009436	Metagenome	318	Y
F012785	Metagenome / Metatranscriptome	277	Y
F017449	Metagenome / Metatranscriptome	240	Y
F018483	Metagenome / Metatranscriptome	235	N
F021644	Metagenome / Metatranscriptome	218	Y
F022276	Metagenome / Metatranscriptome	215	Y
F025377	Metagenome	202	Y
F030538	Metagenome / Metatranscriptome	185	Y
F046963	Metagenome	150	N
F050637	Metagenome	145	Y
F056187	Metagenome / Metatranscriptome	138	N
F077084	Metagenome	117	Y
F082894	Metagenome / Metatranscriptome	113	Y
F084286	Metagenome / Metatranscriptome	112	Y
F085295	Metagenome / Metatranscriptome	111	Y
F103989	Metagenome	101	N

Family

Category

Number of Sequences

3D Structure?

F000402

Metagenome / Metatranscriptome

1180

F000545

Metagenome / Metatranscriptome

1038

F002241

Metagenome / Metatranscriptome

579

F003507

Metagenome / Metatranscriptome

482

F004115

Metagenome / Metatranscriptome

452

F005974

Metagenome / Metatranscriptome

384

F007188

Metagenome / Metatranscriptome

356

F007370

Metagenome / Metatranscriptome

352

F009436

Metagenome

318

F012785

Metagenome / Metatranscriptome

277

F017449

Metagenome / Metatranscriptome

240

F018483

Metagenome / Metatranscriptome

235

F021644

Metagenome / Metatranscriptome

218

F022276

Metagenome / Metatranscriptome

215

F025377

Metagenome

202

F030538

Metagenome / Metatranscriptome

185

F046963

Metagenome

150

F050637

Metagenome

145

F056187

Metagenome / Metatranscriptome

138

F077084

Metagenome

117

F082894

Metagenome / Metatranscriptome

113

F084286

Metagenome / Metatranscriptome

112

F085295

Metagenome / Metatranscriptome

111

F103989

Metagenome

101

Scaffold	Taxonomy	Length	IMG/M Link
Ga0209852_1000003	All Organisms → cellular organisms → Bacteria	11278	Open in IMG/M
Ga0209852_1000047	All Organisms → cellular organisms → Bacteria	2799	Open in IMG/M
Ga0209852_1000105	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	2289	Open in IMG/M
Ga0209852_1004485	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	767	Open in IMG/M
Ga0209852_1005860	Not Available	701	Open in IMG/M
Ga0209852_1006147	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
Ga0209852_1006930	All Organisms → cellular organisms → Archaea	661	Open in IMG/M
Ga0209852_1007552	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
Ga0209852_1007702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus asaccharovorans	637	Open in IMG/M
Ga0209852_1007745	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	636	Open in IMG/M
Ga0209852_1008846	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
Ga0209852_1009220	All Organisms → cellular organisms → Bacteria → Nitrospirae	599	Open in IMG/M
Ga0209852_1010216	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → unclassified Candidatus Nitrosotenuis → Candidatus Nitrosotenuis sp.	578	Open in IMG/M
Ga0209852_1010240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	577	Open in IMG/M
Ga0209852_1010445	Not Available	573	Open in IMG/M
Ga0209852_1010821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
Ga0209852_1011992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	545	Open in IMG/M
Ga0209852_1012170	Not Available	542	Open in IMG/M
Ga0209852_1012271	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
Ga0209852_1014094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
Ga0209852_1014432	Not Available	510	Open in IMG/M
Ga0209852_1014619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	507	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0209852_1000003

All Organisms → cellular organisms → Bacteria

11278

Open in IMG/M

Ga0209852_1000047

All Organisms → cellular organisms → Bacteria

2799

Open in IMG/M

Ga0209852_1000105

All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales

2289

Open in IMG/M

Ga0209852_1004485

All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium

767

Open in IMG/M

Ga0209852_1005860

Not Available

701

Open in IMG/M

Ga0209852_1006147

All Organisms → cellular organisms → Bacteria

690

Open in IMG/M

Ga0209852_1006930

All Organisms → cellular organisms → Archaea

661

Open in IMG/M

Ga0209852_1007552

All Organisms → cellular organisms → Bacteria

641

Open in IMG/M

Ga0209852_1007702

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus asaccharovorans

637

Open in IMG/M

Ga0209852_1007745

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes

636

Open in IMG/M

Ga0209852_1008846

All Organisms → cellular organisms → Bacteria

608

Open in IMG/M

Ga0209852_1009220

All Organisms → cellular organisms → Bacteria → Nitrospirae

599

Open in IMG/M

Ga0209852_1010216

All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis → unclassified Candidatus Nitrosotenuis → Candidatus Nitrosotenuis sp.

578

Open in IMG/M

Ga0209852_1010240

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi

577

Open in IMG/M

Ga0209852_1010445

Not Available

573

Open in IMG/M

Ga0209852_1010821

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium

566

Open in IMG/M

Ga0209852_1011992

All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis

545

Open in IMG/M

Ga0209852_1012170

Not Available

542

Open in IMG/M

Ga0209852_1012271

All Organisms → cellular organisms → Bacteria → Acidobacteria

541

Open in IMG/M

Ga0209852_1014094

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

514

Open in IMG/M

Ga0209852_1014432

Not Available

510

Open in IMG/M

Ga0209852_1014619

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi

507

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0209852_1000003	Ga0209852_10000037	F084286	MAFNCGVSFGACMVRITKVDENGNVIAGNNSYVTDKPISISVNPNIETGNAFSVRNGCGCSISRRKFPDTFNWWELSLQTATLEPEMIAFMLGADTIDDGADVVGVAFPSALACEDANPAVAFEFWSEHVVGSGLDATYPYFHWVFPSSVWQIGDNTFEEGPAQPTLNAFTQTNGNWGDGPYGDGPPDSQDISEGGFWATADALPTAECAAQAVTATS
Ga0209852_1000047	Ga0209852_10000471	F007370	MPHPEPEDSRVVSVRLPTTLVQRLDRVLDWHMTHRRRPTTRNAALREALGDWLDQHEQLAGLLDPESLRQQFRAAYDSLRPSPDGVPIPRLRRLLPWPRERFNTVLEALRAAQAIDLEPLSAQVGDTQATHDSYQVYGQCYGRLRWRA
Ga0209852_1000105	Ga0209852_10001052	F022276	MSGVLALAVAIGLVFGAHKLCNLIRAPRWFTKFLFIGAFLSITYFLAEDILPESKKPWGIWVALLGAATGIIPVGFIVFKHLDDGNDRTSHDSTQSSLHK
Ga0209852_1004485	Ga0209852_10044851	F003507	MYACGLREVQADRAQAHFVLPETLAQFRSRLDQELMDTLVAIQAAAAIEAGFVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKKTCSSSSGSPDRPLSSRPH
Ga0209852_1005860	Ga0209852_10058602	F005974	VMTRFALDDFLRGNALERAQVYEILNRIGAMSVEQIQREEDLIPNES
Ga0209852_1006147	Ga0209852_10061472	F025377	MRAYWKWVIKSVPSLGLGLLMLLSTVTPRQARSNVEAWLIYFGIENIPPWLADKSTDTWVFWIAFVGFCVWAIHLYLRPNLRNGKLSVMIRAGEPWVQVDPGIDQSQAAHTSGKLYTYRIALINSADSTLRNVEVKLMSLEKKPQNFHAMGSHLKLRHDQVGTTNFNVHPTK
Ga0209852_1006930	Ga0209852_10069302	F046963	MALTIELKETLHQLIDNLMINPQQMRNMAYDLKPLTKDDVEVAFGIFVGYVTGGFAELFFESQKRSMTASELIQVRKILFERALEMKKAIAYVRAQESKS
Ga0209852_1007552	Ga0209852_10075522	F007188	HVLLPVLLAALRTLGDAPTRSLTALAQRLGVSEATADAMVTPLADEPAPVAAVPAVAPASPLLPMTGRNDGSSAPKTLLNRKRVIAGRKAIIR
Ga0209852_1007702	Ga0209852_10077021	F085295	MNGLSASGLADLAGVTEAEVQRLVDLGILVARDSAGPFLETDVQKVRLATACERAGLPMAGIAAAIRGGRLSFAFLEAAPYRRWAVRSARTYRQVSEESGVPLDTLAGVLGAMGFARMEPDERIREDELEIVPLLRLARSTGILDPVWLARIGRAYAEGLRLAANVENEAYRA
Ga0209852_1007745	Ga0209852_10077452	F018483	MMCQAVEAYIYSKKGVVVKINRIAIISDSRQMEMLAYAYAYANGDR
Ga0209852_1008846	Ga0209852_10088462	F077084	RLGDDGSGVRAAVAALGRRGKTTRIPDAVRAQALAYSRRQRAAGHSWVRIAHAVGVSVGALQNWLRTPPPARTLVPVAVASEMPAGALVVVSPGGYRVEGLDLPTASALLRTLG
Ga0209852_1009220	Ga0209852_10092201	F009436	MELAHISSAAELLTIEHPHFGRIHPPGLLKSTIGTFTGTSQKAAAIADYSSGNRQTVAFQIDPRNFMVTIASSYVLVTLKEGASRHPVIHKTWRLVGQRKGEEVTEFFGTVHTYIDSDGLKWEHRFERSPHEDELIGFGSSGEEILIITLESFYPTTAPDLRGVII
Ga0209852_1010216	Ga0209852_10102161	F103989	MNMGKSAIKESNNHQEFDGEINATDIFMRDLRRSYPEFAKALEEFMKKELQRLDDELK
Ga0209852_1010240	Ga0209852_10102401	F056187	MSNYLDDYVSVQDRLKEFINAYPDYRIKTHILAESLVANCDVYIIKTELYRTEADLHPWTTGLSS
Ga0209852_1010240	Ga0209852_10102402	F004115	SQEWWKVQSAKIRISISLDMPLSWVDYDFRVQKIGTTLSLTRNHNSNQYCDYCKYRWGQNKNGWDLRATTPAVWKVQSETPLRKAQVRFYCQPCADDAQNWPDGTFYSLKEQLEDAINDFAGREKLDVQLPR
Ga0209852_1010445	Ga0209852_10104451	F017449	VGGRRTRRPGEISIPPGSGFGKGRSCTCWPRPNDARPCTPQTCDWRCRACRVHGRPFYSHGDLQYLEHGTGPLVAELDRLWWVRGTGKRRSARAGVWPWR
Ga0209852_1010821	Ga0209852_10108211	F082894	MQALSNAEILERALAKARANNPEWKPILPNRPEDLIEMGHENVVLFERGFAQAFWGMAPYTVVPASNGGSRSQDNDIPAWRYHLQGLAVAPDLFAYLAKFV
Ga0209852_1011992	Ga0209852_10119921	F000402	GHNDCTSGVCPGASENGETVSLYVDYNHPLLQLKRALPWEALFEVLTRHWRRAGKNTDGRPGLAWDVTLYVPLVVLMLVKNLNARDMESYLAENVVARVFIGRQDAPRPQIRDHSNIARAYAALGKEGVDEINALMLHVAKDFGFADVSILSADTTAQELPIGYPNEPGILRGLAQRCGR
Ga0209852_1012170	Ga0209852_10121701	F050637	MQLNSNGQIQRSAAQWGEIIARYRQSGMGSRQFCEEEGLTLRTFEKWYGRIRRSETSKGKFVEVQAPLGTGGPWAVEVEFPTGVRLRVRG
Ga0209852_1012271	Ga0209852_10122711	F030538	RSWHYSNVVMKDRIAELTASRQRLCRQLPDPSPIFPGSLLSRMIHCNKPGCRYCEKGKGKGHGPIWILSVSLGNRKVRQIPVPVEFKQEVEKGLRSFAHMRERLKQIAHINVELLKERKRRR
Ga0209852_1014094	Ga0209852_10140942	F021644	MSTTRLRLVVAGETLFPPRALFSWRTWGTSRFPTPLHAHSA
Ga0209852_1014432	Ga0209852_10144321	F012785	MVIHYPPEQLRYNSDQPTAITDVLVATSGSSARTGDIPLGTPTCSVRTRHGRWALYPHGDEVVVVWPGGALVGPAVEVAGALDRLGGDRHDHLDRAAAAAIRRFLTDP
Ga0209852_1014619	Ga0209852_10146191	F000545	WALGLSEMKQDAHPFKCSTCLAVTPHIELYRYETSDIPEAPEEVWLIECQRCFLQRIIYPSDRVASKEDDITRCDKCGNWKMKSGKCRICRLAAGFEQISVKYWTGNATMERPYNDEQTPLY
Ga0209852_1014619	Ga0209852_10146192	F002241	MSRPHSIRYIRQLMEWGFDKEFIARDCGINVSSLDVRLNRAKKREQDGNQGTE

Scaffold ID

Protein ID

Family

Sequence

Ga0209852_1000003

Ga0209852_10000037

F084286

MAFNCGVSFGACMVRITKVDENGNVIAGNNSYVTDKPISISVNPNIETGNAFSVRNGCGCSISRRKFPDTFNWWELSLQTATLEPEMIAFMLGADTIDDGADVVGVAFPSALACEDANPAVAFEFWSEHVVGSGLDATYPYFHWVFPSSVWQIGDNTFEEGPAQPTLNAFTQTNGNWGDGPYGDGPPDSQDISEGGFWATADALPTAECAAQAVTATS

Ga0209852_1000047

Ga0209852_10000471

F007370

MPHPEPEDSRVVSVRLPTTLVQRLDRVLDWHMTHRRRPTTRNAALREALGDWLDQHEQLAGLLDPESLRQQFRAAYDSLRPSPDGVPIPRLRRLLPWPRERFNTVLEALRAAQAIDLEPLSAQVGDTQATHDSYQVYGQCYGRLRWRA

Ga0209852_1000105

Ga0209852_10001052

F022276

MSGVLALAVAIGLVFGAHKLCNLIRAPRWFTKFLFIGAFLSITYFLAEDILPESKKPWGIWVALLGAATGIIPVGFIVFKHLDDGNDRTSHDSTQSSLHK

Ga0209852_1004485

Ga0209852_10044851

F003507

MYACGLREVQADRAQAHFVLPETLAQFRSRLDQELMDTLVAIQAAAAIEAGFVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKKTCSSSSGSPDRPLSSRPH

Ga0209852_1005860

Ga0209852_10058602

F005974

VMTRFALDDFLRGNALERAQVYEILNRIGAMSVEQIQREEDLIPNES

Ga0209852_1006147

Ga0209852_10061472

F025377

MRAYWKWVIKSVPSLGLGLLMLLSTVTPRQARSNVEAWLIYFGIENIPPWLADKSTDTWVFWIAFVGFCVWAIHLYLRPNLRNGKLSVMIRAGEPWVQVDPGIDQSQAAHTSGKLYTYRIALINSADSTLRNVEVKLMSLEKKPQNFHAMGSHLKLRHDQVGTTNFNVHPTK

Ga0209852_1006930

Ga0209852_10069302

F046963

MALTIELKETLHQLIDNLMINPQQMRNMAYDLKPLTKDDVEVAFGIFVGYVTGGFAELFFESQKRSMTASELIQVRKILFERALEMKKAIAYVRAQESKS

Ga0209852_1007552

Ga0209852_10075522

F007188

HVLLPVLLAALRTLGDAPTRSLTALAQRLGVSEATADAMVTPLADEPAPVAAVPAVAPASPLLPMTGRNDGSSAPKTLLNRKRVIAGRKAIIR

Ga0209852_1007702

Ga0209852_10077021

F085295

MNGLSASGLADLAGVTEAEVQRLVDLGILVARDSAGPFLETDVQKVRLATACERAGLPMAGIAAAIRGGRLSFAFLEAAPYRRWAVRSARTYRQVSEESGVPLDTLAGVLGAMGFARMEPDERIREDELEIVPLLRLARSTGILDPVWLARIGRAYAEGLRLAANVENEAYRA

Ga0209852_1007745

Ga0209852_10077452

F018483

MMCQAVEAYIYSKKGVVVKINRIAIISDSRQMEMLAYAYAYANGDR

Ga0209852_1008846

Ga0209852_10088462

F077084

RLGDDGSGVRAAVAALGRRGKTTRIPDAVRAQALAYSRRQRAAGHSWVRIAHAVGVSVGALQNWLRTPPPARTLVPVAVASEMPAGALVVVSPGGYRVEGLDLPTASALLRTLG

Ga0209852_1009220

Ga0209852_10092201

F009436

MELAHISSAAELLTIEHPHFGRIHPPGLLKSTIGTFTGTSQKAAAIADYSSGNRQTVAFQIDPRNFMVTIASSYVLVTLKEGASRHPVIHKTWRLVGQRKGEEVTEFFGTVHTYIDSDGLKWEHRFERSPHEDELIGFGSSGEEILIITLESFYPTTAPDLRGVII

Ga0209852_1010216

Ga0209852_10102161

F103989

MNMGKSAIKESNNHQEFDGEINATDIFMRDLRRSYPEFAKALEEFMKKELQRLDDELK

Ga0209852_1010240

Ga0209852_10102401

F056187

MSNYLDDYVSVQDRLKEFINAYPDYRIKTHILAESLVANCDVYIIKTELYRTEADLHPWTTGLSS

Ga0209852_1010240

Ga0209852_10102402

F004115

SQEWWKVQSAKIRISISLDMPLSWVDYDFRVQKIGTTLSLTRNHNSNQYCDYCKYRWGQNKNGWDLRATTPAVWKVQSETPLRKAQVRFYCQPCADDAQNWPDGTFYSLKEQLEDAINDFAGREKLDVQLPR

Ga0209852_1010445

Ga0209852_10104451

F017449

VGGRRTRRPGEISIPPGSGFGKGRSCTCWPRPNDARPCTPQTCDWRCRACRVHGRPFYSHGDLQYLEHGTGPLVAELDRLWWVRGTGKRRSARAGVWPWR

Ga0209852_1010821

Ga0209852_10108211

F082894

MQALSNAEILERALAKARANNPEWKPILPNRPEDLIEMGHENVVLFERGFAQAFWGMAPYTVVPASNGGSRSQDNDIPAWRYHLQGLAVAPDLFAYLAKFV

Ga0209852_1011992

Ga0209852_10119921

F000402

GHNDCTSGVCPGASENGETVSLYVDYNHPLLQLKRALPWEALFEVLTRHWRRAGKNTDGRPGLAWDVTLYVPLVVLMLVKNLNARDMESYLAENVVARVFIGRQDAPRPQIRDHSNIARAYAALGKEGVDEINALMLHVAKDFGFADVSILSADTTAQELPIGYPNEPGILRGLAQRCGR

Ga0209852_1012170

Ga0209852_10121701

F050637

MQLNSNGQIQRSAAQWGEIIARYRQSGMGSRQFCEEEGLTLRTFEKWYGRIRRSETSKGKFVEVQAPLGTGGPWAVEVEFPTGVRLRVRG

Ga0209852_1012271

Ga0209852_10122711

F030538

RSWHYSNVVMKDRIAELTASRQRLCRQLPDPSPIFPGSLLSRMIHCNKPGCRYCEKGKGKGHGPIWILSVSLGNRKVRQIPVPVEFKQEVEKGLRSFAHMRERLKQIAHINVELLKERKRRR

Ga0209852_1014094

Ga0209852_10140942

F021644

MSTTRLRLVVAGETLFPPRALFSWRTWGTSRFPTPLHAHSA

Ga0209852_1014432

Ga0209852_10144321

F012785

MVIHYPPEQLRYNSDQPTAITDVLVATSGSSARTGDIPLGTPTCSVRTRHGRWALYPHGDEVVVVWPGGALVGPAVEVAGALDRLGGDRHDHLDRAAAAAIRRFLTDP

Ga0209852_1014619

Ga0209852_10146191

F000545

WALGLSEMKQDAHPFKCSTCLAVTPHIELYRYETSDIPEAPEEVWLIECQRCFLQRIIYPSDRVASKEDDITRCDKCGNWKMKSGKCRICRLAAGFEQISVKYWTGNATMERPYNDEQTPLY

Ga0209852_1014619

Ga0209852_10146192

F002241

MSRPHSIRYIRQLMEWGFDKEFIARDCGINVSSLDVRLNRAKKREQDGNQGTE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026856: Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_40_50 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences