Sample 3300026428

Basic Information
IMG/M Taxon OID	3300026428 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133460 \| Gp0293502 \| Ga0255309
Sample Name	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepB_8d (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	137918835
Sequencing Scaffolds	56
Novel Protein Genes	57
Associated Families	43

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Lautropia → unclassified Lautropia → Lautropia sp.	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → Viruses → Predicted Viral	3
Not Available	36
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1
All Organisms → cellular organisms → Eukaryota → Cryptophyceae	5
All Organisms → cellular organisms → Eukaryota → Sar	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater → Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river → river water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: Louisiana
Coordinates	Lat. (^o)	29.8571	Long. (^o)	-89.9778	Alt. (m)	N/A	Depth (m)	5
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000344	Metagenome / Metatranscriptome	1257	Y
F006468	Metagenome / Metatranscriptome	372	Y
F007472	Metagenome / Metatranscriptome	350	N
F016245	Metagenome / Metatranscriptome	248	N
F017444	Metagenome / Metatranscriptome	240	Y
F017971	Metagenome / Metatranscriptome	237	Y
F018379	Metagenome / Metatranscriptome	235	Y
F022146	Metagenome / Metatranscriptome	215	Y
F023494	Metagenome / Metatranscriptome	210	Y
F026478	Metagenome / Metatranscriptome	197	Y
F032540	Metagenome / Metatranscriptome	179	N
F034901	Metagenome / Metatranscriptome	173	Y
F039170	Metagenome / Metatranscriptome	164	Y
F042748	Metagenome / Metatranscriptome	157	Y
F042749	Metagenome / Metatranscriptome	157	N
F044315	Metagenome / Metatranscriptome	154	N
F046955	Metagenome / Metatranscriptome	150	Y
F047008	Metagenome / Metatranscriptome	150	N
F051067	Metagenome / Metatranscriptome	144	N
F054052	Metagenome / Metatranscriptome	140	N
F058592	Metagenome / Metatranscriptome	134	Y
F059663	Metatranscriptome	133	N
F060853	Metagenome / Metatranscriptome	132	N
F060937	Metagenome / Metatranscriptome	132	Y
F063745	Metagenome / Metatranscriptome	129	Y
F076149	Metagenome / Metatranscriptome	118	N
F078630	Metagenome / Metatranscriptome	116	N
F079635	Metagenome / Metatranscriptome	115	N
F079656	Metagenome / Metatranscriptome	115	N
F080126	Metagenome / Metatranscriptome	115	Y
F082153	Metagenome / Metatranscriptome	113	Y
F084131	Metagenome / Metatranscriptome	112	N
F089936	Metagenome / Metatranscriptome	108	Y
F091401	Metagenome / Metatranscriptome	107	N
F091922	Metagenome / Metatranscriptome	107	Y
F092088	Metagenome / Metatranscriptome	107	N
F095362	Metagenome / Metatranscriptome	105	Y
F100333	Metagenome / Metatranscriptome	102	N
F100451	Metagenome / Metatranscriptome	102	N
F101271	Metagenome / Metatranscriptome	102	N
F102614	Metagenome / Metatranscriptome	101	N
F102620	Metagenome / Metatranscriptome	101	Y
F103121	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0255309_1003233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Lautropia → unclassified Lautropia → Lautropia sp.	2845	Open in IMG/M
Ga0255309_1004598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2413	Open in IMG/M
Ga0255309_1005576	All Organisms → Viruses → Predicted Viral	2208	Open in IMG/M
Ga0255309_1008831	Not Available	1787	Open in IMG/M
Ga0255309_1012236	Not Available	1526	Open in IMG/M
Ga0255309_1014617	All Organisms → Viruses → Predicted Viral	1397	Open in IMG/M
Ga0255309_1015659	Not Available	1352	Open in IMG/M
Ga0255309_1018081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Lautropia → unclassified Lautropia → Lautropia sp.	1255	Open in IMG/M
Ga0255309_1020174	Not Available	1185	Open in IMG/M
Ga0255309_1020411	Not Available	1178	Open in IMG/M
Ga0255309_1021702	Not Available	1141	Open in IMG/M
Ga0255309_1022028	Not Available	1132	Open in IMG/M
Ga0255309_1024794	Not Available	1062	Open in IMG/M
Ga0255309_1025471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1047	Open in IMG/M
Ga0255309_1026720	Not Available	1021	Open in IMG/M
Ga0255309_1026963	All Organisms → Viruses → Predicted Viral	1016	Open in IMG/M
Ga0255309_1027214	Not Available	1011	Open in IMG/M
Ga0255309_1028116	Not Available	994	Open in IMG/M
Ga0255309_1029251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	972	Open in IMG/M
Ga0255309_1032426	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	918	Open in IMG/M
Ga0255309_1034181	Not Available	890	Open in IMG/M
Ga0255309_1034254	Not Available	889	Open in IMG/M
Ga0255309_1034545	Not Available	885	Open in IMG/M
Ga0255309_1034573	Not Available	884	Open in IMG/M
Ga0255309_1039023	All Organisms → cellular organisms → Eukaryota → Sar	827	Open in IMG/M
Ga0255309_1039168	Not Available	825	Open in IMG/M
Ga0255309_1046053	Not Available	754	Open in IMG/M
Ga0255309_1047074	Not Available	745	Open in IMG/M
Ga0255309_1047428	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	742	Open in IMG/M
Ga0255309_1048065	Not Available	737	Open in IMG/M
Ga0255309_1048309	Not Available	735	Open in IMG/M
Ga0255309_1052056	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	705	Open in IMG/M
Ga0255309_1052684	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	700	Open in IMG/M
Ga0255309_1052702	Not Available	700	Open in IMG/M
Ga0255309_1053115	Not Available	697	Open in IMG/M
Ga0255309_1055252	Not Available	682	Open in IMG/M
Ga0255309_1059496	Not Available	654	Open in IMG/M
Ga0255309_1061044	Not Available	645	Open in IMG/M
Ga0255309_1066152	Not Available	618	Open in IMG/M
Ga0255309_1067697	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	610	Open in IMG/M
Ga0255309_1069499	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	602	Open in IMG/M
Ga0255309_1071197	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	593	Open in IMG/M
Ga0255309_1073641	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	582	Open in IMG/M
Ga0255309_1078519	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	559	Open in IMG/M
Ga0255309_1078792	Not Available	557	Open in IMG/M
Ga0255309_1079748	Not Available	553	Open in IMG/M
Ga0255309_1082413	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	542	Open in IMG/M
Ga0255309_1084675	Not Available	533	Open in IMG/M
Ga0255309_1086604	Not Available	525	Open in IMG/M
Ga0255309_1086659	Not Available	525	Open in IMG/M
Ga0255309_1086705	Not Available	525	Open in IMG/M
Ga0255309_1089219	Not Available	516	Open in IMG/M
Ga0255309_1089281	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	516	Open in IMG/M
Ga0255309_1089758	Not Available	514	Open in IMG/M
Ga0255309_1091192	Not Available	509	Open in IMG/M
Ga0255309_1093835	Not Available	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0255309_1003233	Ga0255309_10032333	F101271	MRLLFDFSEAIAHQREALAKRDWAKLQQSIQALQQAMHQIASFPGGAEGVRHQLVASEGEARETADRLIEKVAIERRSSAELIRLQLQRLQALHTMTSLDEETTTYSESGTSKGRIGRLSTWV
Ga0255309_1004598	Ga0255309_10045982	F023494	MKGNTALNRTFLSFPQLNRLVTTTNFIDKKAHVRELHFVTSFQSNQLSKLKTKELG
Ga0255309_1005576	Ga0255309_10055762	F046955	MPAPRQMTANTLNALKGWPQMNAVDYHAAFDSAIPSGDLPVLAGSVVSLNPSGNFILGVGTSAVMPMFLFNNSDDPDVVHDGGDASTTPGVWIPISPTGQAMALVAVGAYELVSTAFVAAAYPPNTPLTANKSGSANPGKLKAGTLYTDMIVGIVSRGVVDNGYGKSALAFWPFPVFPN
Ga0255309_1008831	Ga0255309_10088311	F103121	LATDGGAVSISWNISTGVGPITYTLQYKVGGFGDWMNLYTGTAPNFSVANFDIIAVVNNSVTYCFQVYATNANGNSAPSNIAEATPFNNNLPTRLWARFEPNCPSYKIEGNNVAETSYEMQRKAGVLQCPANGRLNFTKAMLWSMASRNELTRKMAWASQSQLYTYDNTTNVSNQEGVGLKVVNNTLSCWTPQPPIICNSSSSSNVPGKPVVLCFSTDAPFNNYRYQRTYASGGTKWPFFSTKR
Ga0255309_1012236	Ga0255309_10122361	F060853	QLLDNLYLTPAPWRKWMQSREEIIQDWQAGKDFLIYNGPYCSIRDIEYLRSSYNRVYIIHDRGSIEV
Ga0255309_1014617	Ga0255309_10146171	F060853	QQLLDNLYLQPAPWRKWLQTREEIINDWKAGKDFRIQSGPYCSIRDIEYLRSSYNRIYIIHDRGSIEV
Ga0255309_1015659	Ga0255309_10156591	F079635	DDAHGENDQNVCRDGYVRVMCNGRILQIRENVVNQSQCMNFLASARPADNLSECIHMANELATVENVKVICDWIAAHIEFASRNAPDDERRSFDQRFFLLNAAGHAAYAAAATDAEKADILDSRKDWLRWREDDPTNEDPKRSKHGGQRTAPFSRGGAAPQERRHRTYEEVQHIMFVANFLELHPTDWHRTFAQAENERIAAQPPGPFQEYGLDPADKFAETVMELCCHILGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIATADLWIHGDDFLFEIVPELQEMQRQEFAAAQAEGKSPQEIEAKYGKPIPDWTYESTQEERAFMKEVPQKEPNEQLKVPAIQVNDSQEADPGFEIGHHWWG
Ga0255309_1018081	Ga0255309_10180812	F101271	MTTDLPIGQHERDAMLLLFDFSEAIAHQREALAKRDWVKLQRSIQALQHAMHQIASFPGGAEGVRHQLVASEGDARETADRLTEKVAIERRSSAELIRLQLQRLQALQAMTSLDDDAGTYTESGATKGRSGRLSTWV
Ga0255309_1020174	Ga0255309_10201741	F051067	MSYNSLTYFDLDLKTLTPMDKFIMRAFVDESYLTNLYQATDWAQQLKMQGQTYCYRYVPQQLGLYSKMYDQNDLIDLTFISYIVPNPYTYDFSVPFNVNGHIIYVDEVDKSFIIARKGREFYESLYAALEMAKEFRANGRYYCYNMVTPNWFLPENQYAAGIPGQKLIL
Ga0255309_1020411	Ga0255309_10204111	F102620	STASAFLRLFRAERVTYEMYSIIDFVHTNVCKIRPPTEVRVFQLSQSMTLPSLAASVLVGDLASNFRAYAPRGVQGIQSQDAFGQTLAKRFEVQLNSGLSMTDIGSGENAVDIIFCNASNEAEVSSGLKAFERVKRGFILIKGYGRAKAPNCGEIILSARLNVHCSLAGFGFCAAL
Ga0255309_1021702	Ga0255309_10217024	F095362	VNIPVQAKFIEWFYNKSFPSYDSKRNRNGFLEEMLDLNKIDHDALQYWIQEAFHQGAKAQRELDSEK
Ga0255309_1022028	Ga0255309_10220283	F101271	MTTDLLTEPIQVDAIRLLFDFSEAVALQREALVGRDWTKLQQSIQLLQHAMQQISSFPGGAEGVREQLLASEGVVRERADQLIERVTIERRSSAELIRLQLQRLQALQTMTSFEEDTGLYSETGATKGRGGRLSTWV
Ga0255309_1024794	Ga0255309_10247941	F079635	INQSQLMNFLASARPADNLSECIHLQNQLASADNVKLICDWLAKHIEFQSRDAPAEERRAFDQRFFLLNPAGHAAYDAAANDQAKADILDSRKDWLRWRVDDPENEDPKRASVAPGVRTPEFKRTGPVEPRLHRTYEEIQHIMFVANFLELHPTDWHVDFAKKEAERIAAQPPGPFQEYGLDPADKFAETVMELCCHHLGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIVTADLWIHGDDFVEKVVPELQAQQREEFAKAKAAGMSDPDIEQKFGKPIPDWTLESTQDERAFMKEVSGSRGQPNFKSASY
Ga0255309_1025471	Ga0255309_10254712	F076149	MNKLLLTTLGMVAAVSAAYAQGTFNANNNFTPAGATAKAFVLGLDGNPLAKANGRVEILSGGTSLSPNGSAGVALTLDGLFFINGLVAPGAGLGGTANLVVRAWDVTTGATYADATSRGSVNVVISSLGGGTTPPATFGNNSDFKGLKLEGGGVIPE
Ga0255309_1026720	Ga0255309_10267201	F101271	MRLLFDFSEAIAQQREALAKRDWAKLQQSIQALQHAMHQIASFPGGAEGVRHQLVASEGEAREAADRLIEKVAIERRSSAELIRLQLQRLQALQAMTSLDDDAGTYTESGATKGRSGRLS
Ga0255309_1026963	Ga0255309_10269631	F079656	YVDYHRMAQTDVPTAFSYDASLITLSTGTHGALYNDAVYYLNGNVVLYQDSTSTSSIAVSPGHVWASTPDLGDNYTITVKGANFQNLLTSAGGSTNVSAQLWLENNKLDLTSVAHSYQVADDSTITFNVGYSDIKNLTDCTSGIVRPTLALGTATGGFHMTGLHFFFDIVE
Ga0255309_1027214	Ga0255309_10272141	F042748	TRSTEMRAVYGLVFSTLALAVVVCVSVNSLEYRPEVELFQQPADATMLKTEHFTPYNPLEDPELAPKYDVDTAKETKQSEDDFKAARGEIKKGMGIMKTVLAKLTKQDDARDKLMDEAITISDRIHSVRHLLINVKAEALGIQTKEDGNWIFTNPFGKGADPPDQDLAPFRGQITELTTKSEKISTDLKDLIKRCHSARNDALVLDSELYDEIHKAKVISADAVQGIHHHLDHVESFNHKDYDIVHRVDAKLNDKFRITRHRLNGMINLANAMSARQPNEVSEVTALATDLLIVNAETQERLGRMANLLDSIEFERGFRAKQ
Ga0255309_1028116	Ga0255309_10281161	F079635	DPYYPDNHPEDAQGVCNPGYVRVMCWQSSACLQIRENIVQQSQLMSYLATGREAENPSECIHMANELATADNLKIICDWLAKHIEFAGRDAPDEERRSFDRRFFLLNAAGHAAYDAASNDQEKADILDARKDWLRWRQDDPENEDPKRTKFGAQRTPPFQRQSPVEQRRHRTYEEIQQIMFVANFLELIPTQWHQDFAQKENERIAQQPPGPFQEYGLDPVDKFADSVMEICCHHLGDMILGCLSPVEMQHRFPTLIGAKVLTAKDRYDILTADLWIHGDAFVQEVVPELQALQRQEIAQAQAQGMSPEEIEKKFGQPIADWTLESTLEQ
Ga0255309_1029251	Ga0255309_10292512	F017444	PIVLKPHQLLDEKNRELSHQAIDEVLKTIGEIYEQEY
Ga0255309_1032426	Ga0255309_10324261	F042749	YHTSITVAASQIPLTMAGSTWMKILAVPCILLVAMAAVMTFMPSDSSVQPTTAVALVQSSQHTQSLALFKHAAIEDVYVYAGKEEHTRHLVPFICRLIKRHRFRLNIHQFFSVDDAPLRSVLWSHDSRVVIFPPFESYPQISSKGFTDMRAYVAAGNNLVFMGSYIALQVMNDAFGFSLRDDYKEGPYYRNDRNVRGTEFEYLPSRLNEPSPRVYGAMAKSLPPGAFSLYDSLGSVVVFYVRYDLGTIVYIGYQFDNPYQIDSWVRVIHAAMAM
Ga0255309_1034181	Ga0255309_10341811	F034901	CVSVSINKIEMLFLISCDCVLMRQKQHMNTRSFAGIYARKLRGPSRFIWTLDTLRIIVRGLFQFHRCGPNRVSLDAIAPHLRALVCDRVKSIVCDSHSNPDFAEHYFERICARWICLPSLRAVLLKLKECDSYASLVGSTSATYDSLRADGFMSRLAYDAFDSEITQLHFSHPGCHLHRLPAIPRPCARPSMGSCFYCGEGLIDKIDWNCFPNCECIGYEGGVDEVLVCSSCVEEMADE
Ga0255309_1034254	Ga0255309_10342541	F080126	MKKITLPLAVVALVGLYAGTASAQCAFDVAPAKGVKGSMVRNYAPCPGTEHPTSNTETEGGTEACTPVVPAEVGGNGTTYTYGDKGKCDVTTSAKLVKDCSLAVDANGQSLGLQAGPCHITYVSSKCSGVYLADGITPIGTADDGWSLATLTRATFNDATNQDMTVIDFPVTFAYSTPSGGKMAVKSSSAEALIPLVGQNNADLPACTSLEIVDVSIKDPDGLPFAKLGGATKP
Ga0255309_1034545	Ga0255309_10345452	F044315	MLALVVCGLVMFVNNGSARAQPLDLLQQTCSGCLAKISKKINALSADQQHMAQQFESELTQLQQSVSKLKAEITHVNPRSGLVRVIKSEVPKAVSPAGASEAAIAVSTQSNHDPEFDESGFKKGANRARNMRDKKYGAFPNRWVDKDTVEAFADHIYGPNPTTLDRKGVEREGYFTMAKIHSGMFYYINLEGVSNHHIKLIMQGTDGYNREYEGYGSIYTGPIYDGDHGVRDYFEVQDLVSGDVEFFRFSHPWTPP
Ga0255309_1034573	Ga0255309_10345731	F084131	LDDDIPARAQFLTQKQEAQKLAHQMFPYLKNKETPEYVLAQQALSQMPWMRNLPNADWIIGVQIEGLKALEAKQKAKPESKPKPAMSSKPPASQSVVSSAGGDVRAPSATKAANQIEALRMQLSKKGGVTANEAAAFLLAREKAKLNR
Ga0255309_1039023	Ga0255309_10390232	F054052	LLLAALLGVASAIYPDDHWSFSKKLTSANIDDEIKAAVDGGKTMFVRLIASAG
Ga0255309_1039168	Ga0255309_10391681	F000344	MRPRHPHAAESGVGKHTARESESAQACADGEERVANAHSRNQ
Ga0255309_1046053	Ga0255309_10460531	F060937	RSAVNGREIERRIAGIIPGDWGTVEPGWLVQLLGSRIARFGEWRQNSPAPLAGVAARHNAIEELGGQGR
Ga0255309_1047074	Ga0255309_10470741	F102614	RVSIAKLQAALMLVAGLAFTSSSISSAVPPTTTGASIVTSQNACVWWYEDFPTSISLSAGEGVKYEGLDLELTDTDEPSIKLYISGNSVEGEPPAGNYDSNTECTWYRTALIQGIEVLVDVDGTAVSSTDAGLAFDYTDLLNGDLPTALEGLNITNTLDVTCDGYWSSTAEIQLNTTSVGANVATAGASNPPKTKLADADSDRCAVELDYSVVVPGDKLPESPGTATTFTLPSIVWTVTADPTVLP
Ga0255309_1047428	Ga0255309_10474281	F091922	QMSKIVNYTAELEHLIVDKLLPVYEDYCRRYPFSPLAKEINYDIIREIKHTKDCGALLKPRKNLA
Ga0255309_1048065	Ga0255309_10480651	F007472	QLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYSYKVEYSYTRVSASDTSLASSLYNYTQTNFDMFGQIVNVQAANTKIVRTTQQTYAQLGATSVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFVGITALRTILIIALLVVVSAEIIAFLAFLGLSDKISSDSPNCLSGPCQKFSDSVTTQLGKSTLAIGTESVEVSLQQVANWGPTAGWYLVLATIPLTVLATIIVVIN
Ga0255309_1048309	Ga0255309_10483091	F089936	MKKALIGMAVGAMALGASVVPASAGYLGSSDDLTLWDGIAGTDGGSTDAPQGPEALCNDGQDDIFEALVLTGGWASRLDTDGNGKPRYTVFQPYDLILNGLLGALGLEISDLNSQPAVVQGILADHIANGSFDENELEDTDLTRITMRSGFVATLTESEYDVMFPPAATFGERQMYENVYIEGVKIEDGDQYANGWLYCIGGIIDSTPQVSHEGLNSEDTPNDGTPGGTNSLPDTL
Ga0255309_1052056	Ga0255309_10520561	F032540	RGSVAVVPELGLATGADQVGGRSLRKRIVVAVVMLAFGCAAVALAAQSSSSDSKLRDTSVLKVGVNDRLDVWRQYQNDEDINPRKKKSPKADWEKQRSIPDFVDGIIGPSPTSMDEGGSKSRGSFNVKKITDKTDFYYLRISDRSGNNDRIRAELVGSDGYRLDWVGFGEIFTGPIHEGNLGETDYLRVDDLVTGEEQFFRFRF
Ga0255309_1052684	Ga0255309_10526841	F032540	SVAVVPELGLATGADQLGGRSLRKRIVVAVVLLAFGCAAVALAAASASTDSKLRDTSVLKVGVSDRLDVWRQYQNDEQVNPRKKKTAKADWEKQRSIPDFVDGIIGPSPTAMDEGGSKSRGSFNVKKITDKTDFYYLRITDRSGNGDRIRAELVGSDGYRLDWVGFGEIFTGPIHEGNLGETDYLRVEDLITGEEQFFRFRF
Ga0255309_1052702	Ga0255309_10527021	F089936	MKKALIGMAVGAMALGASVVPASAGYLDETETLWDGIAGTDGGSTDTPAQTGALCNDGQDDIFEAMVLTGGWAERLDTDGNGKPRYTVFQPYDVILNGLLGALGLEISDLNSQPAVVQGVLADHIANGSFDENELEDADLTRITMRSGFVATLSNSEYDIPGALIAGTFGERSIYDNVYIEGSKIQNGSPYSNGWLYCIAGIIDSTPQVSHEGLNSEDTPNDGTPGGTNSLPD
Ga0255309_1053115	Ga0255309_10531151	F091401	YNYTQTNFDMFGQTVNVQTANNNKIVRTTQQTYAQLGATNVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFVGITALRTILIIALLIVVSAEIIAFLAFLGLSDKIASDSPNCLTGPCQKFSDSVTTQLGVNTLTIGNEANVAATLQSVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0255309_1055252	Ga0255309_10552521	F100451	SRKDWLRWREDDPTNEDPKRSKHGGQRTAPFSRGGAAPQDRRHRTYEEVQHLLFVSSFLELHPTDWHRTFAQAENERIAALPKGPFAEYGLDPNEKFAETVMELCCNALGDKILACESPVDMQHHFPTVMGAKALTAKDRYDIATADLWIHGDDFMFEIVPEFQEMQRQEFAAAQAEGMSAQDIEAKYGKPIPDWTYESTQEERAFMKEVPQKEPNEQLKVPAIQIS
Ga0255309_1059496	Ga0255309_10594961	F000344	MRPRHPHAAESGVGKHTARESERAQACAAGKERVANA
Ga0255309_1061044	Ga0255309_10610441	F059663	NIATTYSSDQAIFSIIKLVQAFAITALLLSGILSVYFVLVFFAGFRAKVVYSWGATGARRIAMLVSLFVVISVVIAFLATTRINNALKPDNPLCVDGPCNKFVDSQTTSLGTYTYNDIVYNMNQSMTWGPAAGWYLFLACIPLSLLLTIVAGLNNYPVPIDSLGSGEAL
Ga0255309_1066152	Ga0255309_10661521	F100451	QHIMFVANFLDLHTTDWHKDFAAKEAERLAAQPPGPFQEYGLDPADKFAETVIELCCHHLGDMILGCESPVDMQHRFPSLLGAKVLTAKDRYDIVTADLWIHGDDFVETVVPELQAAQRQEYAQARASGMSEEDIEKKFGKPIPDWTLESTQEERAFMKEVPGQEGNPTLRVPAIKINDQQPADPGFEIGHHWWG
Ga0255309_1067697	Ga0255309_10676971	F078630	QFVEKFVRHPDLKNDMIIYIDAQTKFLHSAIEATNGIVSTCMREFYHTKLEKLLNPFSIDWHKAGWDAWIAQSRAEQKTNK
Ga0255309_1069499	Ga0255309_10694991	F092088	VSFPRTLRLDEKSALKSKVGHVFRELKEKEVYPDLRVLLYVVYEYKNAESFWGPYMRLLPKKHNNIMALTDAELRKLLRRPGCENTHNLGVQMRRTFNKFYNQYKQLVEPNYPGVLQFTRDELLWGFNTLVTNGWGTGADGTGDKILVPFSDLPVHRRESAQKASNRGFISAAKEYHAGEELTFDYGLLNDAILAFYGTP
Ga0255309_1071197	Ga0255309_10711971	F006468	RLKNLLDVKMASYLRYLGTKNAVNRATDYHYLCLAVTDSTAPVNGIDYIHPSVKPVVDYATAVITKGLMPNGEINFEFVAEDEQDEVAARQATDMVSKVVNQMNDAHFILERWVMDANMHKNGMMMIKPVREQIVRYIETEGTLEQLRAFEAQAAESGLTALRQSRRQISVDVAKAMQEVQMLVGEEQATIAQDSMT
Ga0255309_1073641	Ga0255309_10736411	F026478	LLIAFVLSLLLVAECSKPKRKAVALDDEEVIQAKDFALKEIIKLSDSYRDMKIAKLISAEKARSAFSDGTNFFLKMELSCVSKCEAPLSPASTCRRGKYKGTNEIIVFWKDDGHYDGIAIDEFPQMDGEFHPCTPSYKGSEKCNPAEHRTPEQAALFMDDPEDDSVPRKEDL
Ga0255309_1078519	Ga0255309_10785192	F063745	VDQLIINSINLATKPNKQPQTPTKLSPRFKALARECGFVFWQNEPHGPGPGNIDWSCDYTSEFEHYSRELVNWTCELMRQEIVRD
Ga0255309_1078792	Ga0255309_10787922	F091401	FDGFRNKILFFIGITALRTILIIALLVVVVAETIAFLAFLGISDKIAKDSPNCLSGPCQKFADTVTTQLGLSDLLVSGGNVAVSLQQVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0255309_1079748	Ga0255309_10797481	F022146	PNAVRCMDARFSCPASSTCIEDSKCSHRGGNVTDAVVNLDAFKVADARDFGSGMKPTAFSICGPITNHFRLPNFCTCREARFGGELGCTIGLQTFITVGASAWILPCASPANFGYRAWASLLGMSQSVGRTWNAAFQANIPIPGATFEIGVAGVGARAELSGDISRFVISTRLAIGVCGRLGV
Ga0255309_1082413	Ga0255309_10824132	F017971	MAIRLFGFTIGQKDVVRQEVPEQSSFALPTQTLYDGAVTITQNAHFGTYVDLE
Ga0255309_1084675	Ga0255309_10846751	F018379	MKIGFIAVVGTASLVASADAGFLGFVASQRVVGANTIIDIFAGVSNASDRFLSVYNLNASTTIAGGFYQQPGLATKAWKPDTAGFTSTRDSIDSFMTAGTYSGGAYGGAFYASANTNGDPNFTAVAGAWNATPGSALANTIPANAGWF
Ga0255309_1086604	Ga0255309_10866041	F016245	QGTGIRMTVSFTPADAVPGDGRFIMTLVGAGFACAANTAVTFVSPAGASGSVSIGPGLVLTLQLGGGVFSAGGAVQFWFGGVTNPSANQSQVNDLAAVTVSSTGDVVGGSVTGVLPAIVNGLGTLSVGLSNSVRQGTGIRMTVSFTPADAVPGDGRFIMTLVGAGFACAANTAV
Ga0255309_1086659	Ga0255309_10866591	F016245	QGTGIVMTVSFTPVDAVPNDGRFVLTLVGAGFACSASTTVTFVSPADGSGYVSISAGLVLTLQLSGGTFSAGQAVQFVFGGVTNPNSNQSHISNIHAATLNAPGNIVGASVTGYLPAIVNGLGALVVGLSNTVRQGTGIVMTVSFTPVDAVPNDGRFVLTLVGAGFACSASTTV
Ga0255309_1086705	Ga0255309_10867051	F059663	LVFFAGFRAKIVYSWGATGARRIAMLTSLFVVISVVIAFLATTGITNALKTDNPVCVDGPCNKFVDSQTTSLGQYTHLGVVYNMNSNMTWGPAAGWFLFLACIPLSLLLTIVAGWNNYPVPIDSLGSGEAL
Ga0255309_1087800	Ga0255309_10878001	F080126	NGVSTLYTYGPKGACSGSTQAKLVDDCSELEDAAGTPLGLQSGPCHVTFVKSKCKGILGTDGVTPIGAPDIGWSFATLSRTTLADDTNGDMTVIDFPVTFLYGEPKNGGMKLSSSSAEALVPLVGANNADLPDCTQIEIVDIIIKDPAGLPFARLGGATVP
Ga0255309_1089219	Ga0255309_10892191	F082153	LELPAVAAPMVRPVTVTVTPLLAATAALVVTTIWVLVGVATAPPLTPLIVAAGDPVLEKKPDGYVSVMVLPIASAPPAVVVNEKVAAAELLPATRSDVAIANEGLVT
Ga0255309_1089281	Ga0255309_10892812	F058592	VVVAGATVTLLPVPTAVPPQLPLYHFQLAPVPKLPPLTLNVVFLPRQIVVLPLIDVAGIEVSRTSSE
Ga0255309_1089758	Ga0255309_10897581	F039170	PHYRTWDGAHFDIQPHTYWGEIVLVQHRRMTGGDIEVQTATVPWFHNSWSESEHGHGGPKGNTALAIAAWGNVMVFYARNHLQSYFLNGNQVTWHNHGWTRIAEGITVYKSGGHFNILIDNGKGRLQLWGYQVGGNNMDIYGHASSSWATGKSLTGAWGDWNGNAGNDQSL
Ga0255309_1091192	Ga0255309_10911921	F100333	IQLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYSYKIEYSYTRVAASDTSLASTLYNYTQTTFDMFGQTVNVQVANTKIVRTSQQTYAQLGASGVNEQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFIGITALRTILIIALLVVVVAETIAFLAFL
Ga0255309_1093835	Ga0255309_10938352	F047008	LEHVRESGGIVHTRPPQGDENGFCLVAMPCAYNPRHAKFYDVSFAWCADNDQFDRKVGEFIALDRQMFGQTTKLPGYIIDNMLEMDLVD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026428: Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepB_8d (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences