NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300022800

3300022800: Microbial communities of marine sponge Rhopaloides odorabile from Great Barrier Reef, Australia - R11 Version 2



Overview

Basic Information
IMG/M Taxon OID3300022800 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0120440 | Gp0149058 | Ga0242715
Sample NameMicrobial communities of marine sponge Rhopaloides odorabile from Great Barrier Reef, Australia - R11 Version 2
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of New South Wales
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size103818056
Sequencing Scaffolds1
Novel Protein Genes1
Associated Families1

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSponge Microbes In A High Co2 World
TypeHost-Associated
TaxonomyHost-Associated → Porifera → Sponge → Unclassified → Unclassified → Marine → Sponge Microbes In A High Co2 World

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Host-associated → Animal → Animal corpus

Location Information
LocationDavies Reef, Great Barrier Reef, Australia
CoordinatesLat. (o)-18.833Long. (o)147.683Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F017963Metagenome / Metatranscriptome237Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0242715_1051197Not Available707Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0242715_1051197Ga0242715_10511971F017963MAASGLVFRSDLVGTGRAIFIVFGINGVRNQRSHLVGPPFPEFKARFSATAGWHFLRNLTRCLLIGGCGQSHVSVKYG

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