Sample 3300022795

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300022795

3300022795: Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S14 Version 2

Overview

Basic Information
IMG/M Taxon OID	3300022795 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0120440 \| Gp0149077 \| Ga0242733
Sample Name	Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S14 Version 2
Sequencing Status	Permanent Draft
Sequencing Center	University of New South Wales
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	36780390
Sequencing Scaffolds	14
Novel Protein Genes	15
Associated Families	12

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	14

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Sponge Microbes In A High Co2 World
Type	Host-Associated
Taxonomy	Host-Associated → Porifera → Sponge → Unclassified → Unclassified → Marine → Sponge Microbes In A High Co2 World

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal corpus

Location Information
Location	Davies Reef, Great Barrier Reef, Australia
Coordinates	Lat. (^o)	-18.833	Long. (^o)	147.683	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F010384	Metagenome / Metatranscriptome	304	Y
F013612	Metagenome / Metatranscriptome	269	Y
F017963	Metagenome / Metatranscriptome	237	Y
F022150	Metagenome / Metatranscriptome	215	Y
F035204	Metagenome / Metatranscriptome	172	Y
F038110	Metagenome / Metatranscriptome	166	Y
F043240	Metagenome / Metatranscriptome	156	Y
F059684	Metagenome / Metatranscriptome	133	Y
F063409	Metagenome / Metatranscriptome	129	Y
F074458	Metagenome / Metatranscriptome	119	Y
F083784	Metagenome	112	Y
F100481	Metagenome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0242733_100153	Not Available	561	Open in IMG/M
Ga0242733_102683	Not Available	536	Open in IMG/M
Ga0242733_110608	Not Available	987	Open in IMG/M
Ga0242733_110653	Not Available	602	Open in IMG/M
Ga0242733_112577	Not Available	519	Open in IMG/M
Ga0242733_113215	Not Available	754	Open in IMG/M
Ga0242733_118793	Not Available	719	Open in IMG/M
Ga0242733_127236	Not Available	509	Open in IMG/M
Ga0242733_135927	Not Available	539	Open in IMG/M
Ga0242733_140316	Not Available	762	Open in IMG/M
Ga0242733_143000	Not Available	521	Open in IMG/M
Ga0242733_143551	Not Available	556	Open in IMG/M
Ga0242733_143884	Not Available	708	Open in IMG/M
Ga0242733_151646	Not Available	587	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0242733_100153	Ga0242733_1001531	F017963	GLVFRSDLVGTGRAISILFGINGVRNQRSHLVGAPFPEFKARFSATAGWHFSRGLTRRLLIGGCGQSTYPKHG
Ga0242733_102683	Ga0242733_1026831	F074458	MYAPNAVTYCQVWFFEMAGILSAVFVFDDNLATELETYTKANVELLSRVAIIALASGDTFSESSLLHL
Ga0242733_104923	Ga0242733_1049232	F100481	MPLSSIKDLAVAISTRAGPAEDDPPLYKLGSKPIQAVCKGESGLGS
Ga0242733_110608	Ga0242733_1106082	F035204	MRMPPCEPVFQMIESGRDGENLEKLSTEATVLKVYYVFHIIGFHVTFNET
Ga0242733_110653	Ga0242733_1106531	F022150	VGPPFPEFKARFSATAGWHFSSDLARRSLIGGCGHSHVSVKYG
Ga0242733_112577	Ga0242733_1125771	F010384	MCNRDSIRGGQMQAQLGIRKRFYRSLSGVDRCSLSWGSGRGLLEVYQGWRDAASAGDQEEVH
Ga0242733_113215	Ga0242733_1132152	F013612	MQHTCRIFVREVLFQQKRWDRGNGRMHPKGANSMATSGLVSRSNLVGTGRAISVLFSENGARNKRSHLVGPPFPAFKAHFSAMAGWHFSRDLSRCLLFDGCGQSHISAKDG
Ga0242733_118793	Ga0242733_1187931	F043240	TWSIEAQEKPWNKTGGMTPWMASTASAGALKSGESETTPPIIARLRNVTCPPP
Ga0242733_127236	Ga0242733_1272361	F022150	AISILFGINGVRNQRSHLVGAPFPEFKARFSAMAGWHFLRDLTRCLLIGGGGQSHVSAKH
Ga0242733_135927	Ga0242733_1359271	F059684	LTGSDLEVAVEGQKVAYTVRYTSYKAVAHRRRQSRDR
Ga0242733_140316	Ga0242733_1403161	F063409	VQGGFEGVRTNPPCSLAKFIFNETAAVQGTIIQLCSGIVTDGIQAIMRLLQGVVTYTSPVEAFATGMKNFDW
Ga0242733_143000	Ga0242733_1430001	F083784	VSVPEXDSKAYIXQENYAVFASLYSVYLYFPTGMDFNDTPLVVTMAAGTTVVTAGIPIVDDEINEAEEVFVVVLEVVSNTTNPMEFTTNTTVCRIPASDRKCSTECLHGLNXVTDSLIQVEEFFN
Ga0242733_143551	Ga0242733_1435511	F010384	MQPQLGIWKRLIRSLLGVDRCSLIWGSERGLLEVYQGWTHAASAGDLEKVY
Ga0242733_143884	Ga0242733_1438841	F059684	RHFTGSHLEVAVEGLKLAYTEHFTSFKAVARSRRQSRDRK
Ga0242733_151646	Ga0242733_1516461	F038110	MVEVCSPAVSEDRGHMSKVDGPESLAISIRDVSYKLMNLKIILLLIHCLVDMPTSQARLSYLVMAERYRTVRVMVSEDR

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