Sample 3300022793

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300022793

3300022793: Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S4 Version 2

Overview

Basic Information
IMG/M Taxon OID	3300022793 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0120440 \| Gp0149081 \| Ga0242737
Sample Name	Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S4 Version 2
Sequencing Status	Permanent Draft
Sequencing Center	University of New South Wales
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	35809329
Sequencing Scaffolds	27
Novel Protein Genes	30
Associated Families	15

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	22
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	4
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Sponge Microbes In A High Co2 World
Type	Host-Associated
Taxonomy	Host-Associated → Porifera → Sponge → Unclassified → Unclassified → Marine → Sponge Microbes In A High Co2 World

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal corpus

Location Information
Location	Davies Reef, Great Barrier Reef, Australia
Coordinates	Lat. (^o)	-18.833	Long. (^o)	147.683	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F010384	Metagenome / Metatranscriptome	304	Y
F015565	Metagenome / Metatranscriptome	253	Y
F017963	Metagenome / Metatranscriptome	237	Y
F022150	Metagenome / Metatranscriptome	215	Y
F023046	Metagenome / Metatranscriptome	211	Y
F024258	Metagenome / Metatranscriptome	206	Y
F035204	Metagenome / Metatranscriptome	172	Y
F043240	Metagenome / Metatranscriptome	156	Y
F049434	Metagenome / Metatranscriptome	146	Y
F059684	Metagenome / Metatranscriptome	133	Y
F069743	Metagenome / Metatranscriptome	123	Y
F073151	Metagenome / Metatranscriptome	120	Y
F076933	Metagenome / Metatranscriptome	117	Y
F093358	Metagenome / Metatranscriptome	106	N
F100481	Metagenome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0242737_100885	Not Available	702	Open in IMG/M
Ga0242737_101842	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	984	Open in IMG/M
Ga0242737_103406	Not Available	758	Open in IMG/M
Ga0242737_106378	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	814	Open in IMG/M
Ga0242737_107971	Not Available	574	Open in IMG/M
Ga0242737_108142	Not Available	526	Open in IMG/M
Ga0242737_111912	Not Available	586	Open in IMG/M
Ga0242737_113195	Not Available	875	Open in IMG/M
Ga0242737_117478	Not Available	547	Open in IMG/M
Ga0242737_121066	Not Available	512	Open in IMG/M
Ga0242737_123332	Not Available	597	Open in IMG/M
Ga0242737_124073	Not Available	795	Open in IMG/M
Ga0242737_127595	Not Available	740	Open in IMG/M
Ga0242737_127837	Not Available	734	Open in IMG/M
Ga0242737_136707	Not Available	531	Open in IMG/M
Ga0242737_137681	Not Available	620	Open in IMG/M
Ga0242737_139791	Not Available	649	Open in IMG/M
Ga0242737_142522	All Organisms → cellular organisms → Eukaryota → Opisthokonta	915	Open in IMG/M
Ga0242737_144955	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	953	Open in IMG/M
Ga0242737_146809	Not Available	530	Open in IMG/M
Ga0242737_148079	Not Available	679	Open in IMG/M
Ga0242737_148490	Not Available	1010	Open in IMG/M
Ga0242737_149045	Not Available	892	Open in IMG/M
Ga0242737_151301	Not Available	523	Open in IMG/M
Ga0242737_156200	Not Available	511	Open in IMG/M
Ga0242737_156518	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	706	Open in IMG/M
Ga0242737_159002	Not Available	511	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0242737_100885	Ga0242737_1008851	F010384	IWKRFIRSLLRVDRCSLSWASGRGLLEVCWGWTNAASAGHLEEVY
Ga0242737_101842	Ga0242737_1018421	F022150	VGPQFPEFKARFSAMAGWHFSRDLTKRLLIGGCGHSHVSVRYG
Ga0242737_103406	Ga0242737_1034061	F035204	MPPCEPVFQVIESGRDGENLEKLSMETTVLNVHYVMHILGFHMTFNET
Ga0242737_106378	Ga0242737_1063782	F022150	GINGVRNQRSHLVGPPFPEFKARFSAMAGWHFLRDLTRHLLIGGCGQSHISAKHG
Ga0242737_107971	Ga0242737_1079711	F022150	SHLVGPPFPELKACFSATTGWHFSRDLDRHLLIGGCGHGHISVKYG
Ga0242737_108142	Ga0242737_1081421	F073151	RYVSGFEKRGNFAQNAKFWHFSSYHHFKAVRASDFILGLGAHQAFCFTNPMFEAVDSLLSEVVAVKPKV
Ga0242737_109472	Ga0242737_1094721	F049434	MKTLEDEEYVVIIAYKFTVFEIWRDFNVLSYIACPHYPYIRVYRLYDIVTISKTVLKPG
Ga0242737_110672	Ga0242737_1106721	F100481	VADIVSVTMPLSSIKDLAVAISTRAGPGEDDPPLYKLGSKPVQAVCKGESGALN
Ga0242737_111912	Ga0242737_1119121	F043240	KPWNKTGGMTPWMASTASAGAFKSGESETTPPIIARLRNVTCPPP
Ga0242737_113195	Ga0242737_1131951	F024258	MRLHVNYACAIGTRLNLELLCVAQNGVVLELRRIAASQSCHSCQFANKRAERGYYDKSDIVLCVK
Ga0242737_117478	Ga0242737_1174781	F035204	MPPCEPVFQVIESGLDGENLEKLSMETTVLNVHYVIHIIGFHVTLMRHD
Ga0242737_121066	Ga0242737_1210661	F015565	MLLFCAKTIVKDSRKFELARLKKKKEKHFGRLVTFWFVTFAMHFSATGCVFRHENTRR
Ga0242737_123332	Ga0242737_1233321	F022150	RNKRSHLVGPPFPEFKARFSATAGWHFSSDLARRSLIGGCGHSHVSVKYG
Ga0242737_124073	Ga0242737_1240732	F035204	QVIESECDGENLEILSMESTVLSMHYVIHIISFHVTLMRPD
Ga0242737_127595	Ga0242737_1275951	F010384	MQPQLGIWKRFIRSLLGVDRCSLSWASGRGLLEVYWGWTDAASAGDQEEVY
Ga0242737_127837	Ga0242737_1278371	F035204	MPMPPCEPVFQVIESGRDGENLEKLSMETTVRNPYYRIHVTFNET
Ga0242737_136707	Ga0242737_1367071	F043240	WSIEAQEKPWNKTGGMTPWMASTVSAGALKSGESKTMLPIIARLRNVTCSPP
Ga0242737_137681	Ga0242737_1376811	F043240	EAQEKPWNKTGGMTPWTSTASAGVLKSGESETTPPIIARLCNVTLAVQMQSPNS
Ga0242737_137713	Ga0242737_1377131	F076933	MIYANCGAIAVITSTTYITIVEFFGEYSAPFSPEVITTPTSILNDIILSMETESWFDFES
Ga0242737_139791	Ga0242737_1397912	F024258	CTIGTRLKLDLLFVAQNSIVLQLHRTAASQNHHFCQFAEKRAERGNYDESVVVLYVK
Ga0242737_142522	Ga0242737_1425222	F017963	VGTGRAISILFGINGVRNKRSHLVGPPFPEFKACFSATAGWHFSRDLTRRLLIGGYGQSHVSTKHG
Ga0242737_144955	Ga0242737_1449551	F010384	VTHCRMSYVQFRQLGIRKRFIRSLLVVDRFSLSWGSGRGLLEVYWGWTDAASAGHLEEV
Ga0242737_146809	Ga0242737_1468091	F069743	HTYMQSHTTHLSIAPSDYGALTGFLLGPFSDSVRQLSFNVSIVNDAIPEDDEDFTARLTLSPADVGKSVTVDPDLATVTILDDEGTIAV
Ga0242737_148079	Ga0242737_1480791	F022150	GINGVRNQRSHLVGPPFPEFKARFSATAGWHFSRDLTRRLLIGGCGHSHVSVKYG
Ga0242737_148490	Ga0242737_1484901	F059684	HLIGSHLEVAVEGRKLAYTVRFASYKAVARKRRQSREMK
Ga0242737_149045	Ga0242737_1490452	F010384	QLGIRKRFIRSLLRVDRCSLSWASGRGLLEVYCGWTDAASAGDLEEVY
Ga0242737_151301	Ga0242737_1513011	F093358	MNLKIILLLIHCLVDMPTSQARLSYLVMSERYHIVRVMVSEDR
Ga0242737_156200	Ga0242737_1562002	F023046	PFPEFKARFSATAGWHFSRDLTRRLLIGGCGQSTHLLSMAEITSGSSFEPNKPTEQQLGY
Ga0242737_156518	Ga0242737_1565181	F010384	MGGISKRFIRSLLGVDRCSLSWGSRRGLLEVYPGWTDAASAGDLEEVY
Ga0242737_159002	Ga0242737_1590022	F015565	MLLFCSKTIVKESRKFELARLKKKKEKHFGRLATVWFGAFAMLCSATGCVFRHENTRK

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