Sample 3300021557

Overview

Basic Information
IMG/M Taxon OID	3300021557 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117787 \| Gp0124801 \| Ga0224710
Sample Name	Marine sponge C. singaporensis microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'control', co14ic 200bp no Eukaryotes last
Sequencing Status	Finished
Sequencing Center	University of New South Wales
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	173530730
Sequencing Scaffolds	15
Novel Protein Genes	15
Associated Families	15

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	7
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Polychaeta → Sedentaria → Scolecida → Capitellidae → Capitella → Capitella teleta	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4
All Organisms → cellular organisms → Bacteria	1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
Type	Host-Associated
Taxonomy	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → C. Singaporensis (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Upa-Upasina 'control' site, Papua New Guinea
Coordinates	Lat. (^o)	-9.828217	Long. (^o)	150.820517	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Family	Category	Number of Sequences	3D Structure?
F002565	Metagenome / Metatranscriptome	547	Y
F003751	Metagenome / Metatranscriptome	470	Y
F004325	Metagenome / Metatranscriptome	443	Y
F008031	Metagenome / Metatranscriptome	340	Y
F016820	Metagenome	244	Y
F023877	Metagenome / Metatranscriptome	208	Y
F029470	Metagenome / Metatranscriptome	188	Y
F037178	Metagenome	168	N
F051267	Metagenome	144	N
F053343	Metagenome / Metatranscriptome	141	Y
F057290	Metagenome	136	N
F064809	Metagenome	128	N
F077401	Metagenome	117	N
F085224	Metagenome	111	N
F087060	Metagenome	110	N

Family

Category

Number of Sequences

3D Structure?

F002565

Metagenome / Metatranscriptome

547

F003751

Metagenome / Metatranscriptome

470

F004325

Metagenome / Metatranscriptome

443

F008031

Metagenome / Metatranscriptome

340

F016820

Metagenome

244

F023877

Metagenome / Metatranscriptome

208

F029470

Metagenome / Metatranscriptome

188

F037178

Metagenome

168

F051267

Metagenome

144

F053343

Metagenome / Metatranscriptome

141

F057290

Metagenome

136

F064809

Metagenome

128

F077401

Metagenome

117

F085224

Metagenome

111

F087060

Metagenome

110

Scaffold	Taxonomy	Length	IMG/M Link
Ga0224710_1002151	Not Available	848	Open in IMG/M
Ga0224710_1049175	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Polychaeta → Sedentaria → Scolecida → Capitellidae → Capitella → Capitella teleta	514	Open in IMG/M
Ga0224710_1053274	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	551	Open in IMG/M
Ga0224710_1053471	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	734	Open in IMG/M
Ga0224710_1054890	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	747	Open in IMG/M
Ga0224710_1056688	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
Ga0224710_1065028	Not Available	573	Open in IMG/M
Ga0224710_1076353	Not Available	618	Open in IMG/M
Ga0224710_1079869	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	729	Open in IMG/M
Ga0224710_1096513	Not Available	1300	Open in IMG/M
Ga0224710_1158441	Not Available	674	Open in IMG/M
Ga0224710_1165289	Not Available	957	Open in IMG/M
Ga0224710_1166434	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	577	Open in IMG/M
Ga0224710_1183481	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	589	Open in IMG/M
Ga0224710_1214528	Not Available	685	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0224710_1002151

Not Available

848

Open in IMG/M

Ga0224710_1049175

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Polychaeta → Sedentaria → Scolecida → Capitellidae → Capitella → Capitella teleta

514

Open in IMG/M

Ga0224710_1053274

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.

551

Open in IMG/M

Ga0224710_1053471

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium

734

Open in IMG/M

Ga0224710_1054890

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium

747

Open in IMG/M

Ga0224710_1056688

All Organisms → cellular organisms → Bacteria

886

Open in IMG/M

Ga0224710_1065028

Not Available

573

Open in IMG/M

Ga0224710_1076353

Not Available

618

Open in IMG/M

Ga0224710_1079869

All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.

729

Open in IMG/M

Ga0224710_1096513

Not Available

1300

Open in IMG/M

Ga0224710_1158441

Not Available

674

Open in IMG/M

Ga0224710_1165289

Not Available

957

Open in IMG/M

Ga0224710_1166434

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium

577

Open in IMG/M

Ga0224710_1183481

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium

589

Open in IMG/M

Ga0224710_1214528

Not Available

685

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0224710_1002151	Ga0224710_10021511	F077401	MTMKTFWAWKHDINSTHKNMSGYTKILARDMNSAYRKAHKHYKHHMFNSDFNVSVMSGETDKHGYAKEVQYSTGKWTRKAWSTYKYFHSLEPEMQERVHNHYKEFGDDWKGQDKTDLRFLVALLRQEPAND
Ga0224710_1049175	Ga0224710_10491751	F085224	MFPYSVFSGMMLELLEMGAPMFYPSKSLLKRWDEQYGIMTQRTSAEGKRNAGGFSNVAYGKDSAPDPNDSVNQDALHYWLEKSEWYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRDERWAEIRRDLTKTNSSGV
Ga0224710_1053274	Ga0224710_10532741	F053343	LSLGGYNEYIKRNLSLHSNHHSIMNPQAHRSTEELKTIVKALSKLSLLNTPEEDQRLFECEQELRKRKKEQDFIDAHFQVITF
Ga0224710_1053471	Ga0224710_10534711	F008031	MATYKSEAGAILQPGNQINKLSGYNDEGVFGWPGVEAFELIGFAKVTNLVGTKASHKSFDLTVPSPDRRPDDRVRDDRTSLVVQASTDRLAYINGAIVAIAQDLPAGGLATFPASPVTADLGGTTGELLLLGPNNGGVPFGVPSTQQNGLAAASSSIQASSSLFAQGLTDTTTGDLPFWTVVTGGGITAANAANSMMYKVTADTTFKVFNVDAIAN
Ga0224710_1054890	Ga0224710_10548902	F003751	MATYKSDAGAILEPGNQINRLSSFNHEGVKGWPGVEAFEQIGFVKINNASADKASFKSFDITVPSPDRRVSDRVRDDRTTLVVKASSARPAYVYGASLALAQDDPSGGLPSFPASPITADLVGTNTEVLLLGPNNGGSPFGIPSTQQNGLAAATSSIAFSGTTIAQGTGAVTAAKLPFWTVVTGGGITAANAANSMMFKVTADTTFKVFNVNAVTDT
Ga0224710_1056688	Ga0224710_10566882	F029470	VTATIARADAADSMMFKVTSDTTFKIFNMDAITDTTANGDGVFISDTASDEGKAAYIVSRVNYLRPAKAVGWNDIQGFIDFASQIGGGDA
Ga0224710_1065028	Ga0224710_10650281	F051267	AICWINYTNAQAIFTYANHEQEMAETEFRLDDSADESEVISKLIKSYFDMDNAEDREMISDIVKVSFCFSDTEYPQKLKKKEAEKFWALPTMKAFLERNGKYYFDEEQRDDVETSIKELLDCWKEEIV
Ga0224710_1076353	Ga0224710_10763531	F016820	LMTKKEFSYIVFSSCGDNVQEIHGVYKDLEGAAYGAKAALSTLFPNHGDKAEIIRCEIISTEEARVTYEKTKPKDIFEKCEDGFCPMPTPQTQEVS
Ga0224710_1079869	Ga0224710_10798691	F037178	MTYLLKKGNLVFKTIHDTGCVDLVAIDKRGKIHLYDVKTSLKYAKGKKKGKRINRVLTPLQKKLRVELLMVDLDEERCWVIQHGRREESLE
Ga0224710_1096513	Ga0224710_10965133	F023877	VDDHYKNFGFYPYEVEVDGQVYSYGTYWEILEDGRFD
Ga0224710_1158441	Ga0224710_11584411	F002565	MESEALMLRAFYFALHFAVIFLGCIIAIHWDFTLGLIIAGTFTVKWFFMFPHMEGRNE
Ga0224710_1165289	Ga0224710_11652892	F087060	MYTIITTKPMTQSHTTSNDTSAKQVVRTLSGITQGKPVVTGDAPQTKKFDPVADQDNRLMQMLELSLAIKDKKSEYDDLRKSFTNDLKAALDDNEENPKIRHSENERVHVYLSKRRVYKYSDKLTAKRLKLEAQMADLKDEEAKEVRHNKAELTKETFTVSFKG
Ga0224710_1166434	Ga0224710_11664341	F004325	PIGSPQLIGIGGTDVQSQLAAGNRDEYANIRMKQGDTRVVEGAKMPSDLDASYLKLNLPGSPLPANGLLVPQNLRAAERNQDMIGVSEQMFLAKYLPAAGLTQLPVGQPPLESKKGKK
Ga0224710_1183481	Ga0224710_11834811	F057290	VIVYPFSGTTQGDCTVSNLKIHEYVNTWLLEPNDQPAGNALDKFYKNFEKEQERTRKAAERMALLGYGLPWTGNKDIEFGQRNAPEETAQFDPTLVTMKLTDTIRRDEGELNRDGRILNNAATTLMSMQKVLNLDFDLIEDVRIGLLTQPLTDFTPDFQFGEVEGGTYLNGERITGAGVSSMDCSTYNPGVEQSIN
Ga0224710_1214528	Ga0224710_12145282	F064809	MLTTTFTGNITFAEIVSQDGQGNNLDNPFLAIKVAVNDVNDNGLTIAVRTKNGLLEAAQNGEDLVGTRVVIAGSIELPSIRSHWVDNDGNLVALKKPQCRVYANTIERLNRKPAPDTVQKELAIK

Scaffold ID

Protein ID

Family

Sequence

Ga0224710_1002151

Ga0224710_10021511

F077401

MTMKTFWAWKHDINSTHKNMSGYTKILARDMNSAYRKAHKHYKHHMFNSDFNVSVMSGETDKHGYAKEVQYSTGKWTRKAWSTYKYFHSLEPEMQERVHNHYKEFGDDWKGQDKTDLRFLVALLRQEPAND

Ga0224710_1049175

Ga0224710_10491751

F085224

MFPYSVFSGMMLELLEMGAPMFYPSKSLLKRWDEQYGIMTQRTSAEGKRNAGGFSNVAYGKDSAPDPNDSVNQDALHYWLEKSEWYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRDERWAEIRRDLTKTNSSGV

Ga0224710_1053274

Ga0224710_10532741

F053343

LSLGGYNEYIKRNLSLHSNHHSIMNPQAHRSTEELKTIVKALSKLSLLNTPEEDQRLFECEQELRKRKKEQDFIDAHFQVITF

Ga0224710_1053471

Ga0224710_10534711

F008031

MATYKSEAGAILQPGNQINKLSGYNDEGVFGWPGVEAFELIGFAKVTNLVGTKASHKSFDLTVPSPDRRPDDRVRDDRTSLVVQASTDRLAYINGAIVAIAQDLPAGGLATFPASPVTADLGGTTGELLLLGPNNGGVPFGVPSTQQNGLAAASSSIQASSSLFAQGLTDTTTGDLPFWTVVTGGGITAANAANSMMYKVTADTTFKVFNVDAIAN

Ga0224710_1054890

Ga0224710_10548902

F003751

MATYKSDAGAILEPGNQINRLSSFNHEGVKGWPGVEAFEQIGFVKINNASADKASFKSFDITVPSPDRRVSDRVRDDRTTLVVKASSARPAYVYGASLALAQDDPSGGLPSFPASPITADLVGTNTEVLLLGPNNGGSPFGIPSTQQNGLAAATSSIAFSGTTIAQGTGAVTAAKLPFWTVVTGGGITAANAANSMMFKVTADTTFKVFNVNAVTDT

Ga0224710_1056688

Ga0224710_10566882

F029470

VTATIARADAADSMMFKVTSDTTFKIFNMDAITDTTANGDGVFISDTASDEGKAAYIVSRVNYLRPAKAVGWNDIQGFIDFASQIGGGDA

Ga0224710_1065028

Ga0224710_10650281

F051267

AICWINYTNAQAIFTYANHEQEMAETEFRLDDSADESEVISKLIKSYFDMDNAEDREMISDIVKVSFCFSDTEYPQKLKKKEAEKFWALPTMKAFLERNGKYYFDEEQRDDVETSIKELLDCWKEEIV

Ga0224710_1076353

Ga0224710_10763531

F016820

LMTKKEFSYIVFSSCGDNVQEIHGVYKDLEGAAYGAKAALSTLFPNHGDKAEIIRCEIISTEEARVTYEKTKPKDIFEKCEDGFCPMPTPQTQEVS

Ga0224710_1079869

Ga0224710_10798691

F037178

MTYLLKKGNLVFKTIHDTGCVDLVAIDKRGKIHLYDVKTSLKYAKGKKKGKRINRVLTPLQKKLRVELLMVDLDEERCWVIQHGRREESLE

Ga0224710_1096513

Ga0224710_10965133

F023877

VDDHYKNFGFYPYEVEVDGQVYSYGTYWEILEDGRFD

Ga0224710_1158441

Ga0224710_11584411

F002565

MESEALMLRAFYFALHFAVIFLGCIIAIHWDFTLGLIIAGTFTVKWFFMFPHMEGRNE

Ga0224710_1165289

Ga0224710_11652892

F087060

MYTIITTKPMTQSHTTSNDTSAKQVVRTLSGITQGKPVVTGDAPQTKKFDPVADQDNRLMQMLELSLAIKDKKSEYDDLRKSFTNDLKAALDDNEENPKIRHSENERVHVYLSKRRVYKYSDKLTAKRLKLEAQMADLKDEEAKEVRHNKAELTKETFTVSFKG

Ga0224710_1166434

Ga0224710_11664341

F004325

PIGSPQLIGIGGTDVQSQLAAGNRDEYANIRMKQGDTRVVEGAKMPSDLDASYLKLNLPGSPLPANGLLVPQNLRAAERNQDMIGVSEQMFLAKYLPAAGLTQLPVGQPPLESKKGKK

Ga0224710_1183481

Ga0224710_11834811

F057290

VIVYPFSGTTQGDCTVSNLKIHEYVNTWLLEPNDQPAGNALDKFYKNFEKEQERTRKAAERMALLGYGLPWTGNKDIEFGQRNAPEETAQFDPTLVTMKLTDTIRRDEGELNRDGRILNNAATTLMSMQKVLNLDFDLIEDVRIGLLTQPLTDFTPDFQFGEVEGGTYLNGERITGAGVSSMDCSTYNPGVEQSIN

Ga0224710_1214528

Ga0224710_12145282

F064809

MLTTTFTGNITFAEIVSQDGQGNNLDNPFLAIKVAVNDVNDNGLTIAVRTKNGLLEAAQNGEDLVGTRVVIAGSIELPSIRSHWVDNDGNLVALKKPQCRVYANTIERLNRKPAPDTVQKELAIK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300021557: Marine sponge C. singaporensis microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'control', co14ic 200bp no Eukaryotes last

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences