Sample 3300021549

Overview

Basic Information
IMG/M Taxon OID	3300021549 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117787 \| Gp0124750 \| Ga0224705
Sample Name	Marine sponge C. singaporensis associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - co35is 200bp no Eukaryotes last
Sequencing Status	Finished
Sequencing Center	University of New South Wales
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	69063236
Sequencing Scaffolds	11
Novel Protein Genes	11
Associated Families	5

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	10
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
Type	Host-Associated
Taxonomy	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Coelocarteria Singaporensis → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Upa-Upasina 'bubble' site, Papua New Guinea
Coordinates	Lat. (^o)	-9.8241	Long. (^o)	150.825833	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000999	Metagenome	809	Y
F027869	Metagenome	193	Y
F085224	Metagenome	111	N
F087060	Metagenome	110	N
F101313	Metagenome / Metatranscriptome	102	N

Family

Category

Number of Sequences

3D Structure?

F000999

Metagenome

809

F027869

Metagenome

193

F085224

Metagenome

111

F087060

Metagenome

110

F101313

Metagenome / Metatranscriptome

102

Scaffold	Taxonomy	Length	IMG/M Link
Ga0224705_1005724	Not Available	847	Open in IMG/M
Ga0224705_1028745	Not Available	542	Open in IMG/M
Ga0224705_1035431	Not Available	517	Open in IMG/M
Ga0224705_1064231	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	520	Open in IMG/M
Ga0224705_1067503	Not Available	546	Open in IMG/M
Ga0224705_1080754	Not Available	543	Open in IMG/M
Ga0224705_1082504	Not Available	605	Open in IMG/M
Ga0224705_1089102	Not Available	1678	Open in IMG/M
Ga0224705_1098934	Not Available	585	Open in IMG/M
Ga0224705_1104705	Not Available	1222	Open in IMG/M
Ga0224705_1105239	Not Available	620	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0224705_1005724

Not Available

847

Open in IMG/M

Ga0224705_1028745

Not Available

542

Open in IMG/M

Ga0224705_1035431

Not Available

517

Open in IMG/M

Ga0224705_1064231

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium

520

Open in IMG/M

Ga0224705_1067503

Not Available

546

Open in IMG/M

Ga0224705_1080754

Not Available

543

Open in IMG/M

Ga0224705_1082504

Not Available

605

Open in IMG/M

Ga0224705_1089102

Not Available

1678

Open in IMG/M

Ga0224705_1098934

Not Available

585

Open in IMG/M

Ga0224705_1104705

Not Available

1222

Open in IMG/M

Ga0224705_1105239

Not Available

620

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0224705_1005724	Ga0224705_10057242	F087060	MTQSQTTSNDTSAKQVVRTLSGITQGKPVVTGDAPQTKKFDPVADQDNRLMQMLELSLAIKDKKSEYDDLRKSFTNDLKAALDDNEENPKIRHSENDRVHVYLSKRRVYKYSDKLTAKRLKLEAQMADLKDEEAKEVRHNKAELTKETFTVSFK
Ga0224705_1028745	Ga0224705_10287451	F101313	MTSALKREFKVGDEVCHTNKFSTGNNFQRKRKGVVLGIERRPVKDGKLRTYIEVLWNTSSVPCFHASHALLHLSEREGKQEEAFHVTHVTELHNFNEHGL
Ga0224705_1035431	Ga0224705_10354311	F085224	FPYSIYSVTMLELLELGVPMFYPSKSLLKRWDGRYGMMWHRTDYYGQRKAGGFSNIAYGKDSAPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTSSTPA
Ga0224705_1064231	Ga0224705_10642312	F027869	MEHAKAKKAKGKAEKALAQMMMEAEMVKASEADLQPEDGYINPMGRIGVVRQTTYSLTNQFDGNTTQSVINPET
Ga0224705_1067503	Ga0224705_10675031	F085224	LRFKAIVMFPYSIWSGVMLELIEMGVPMFYPSKSLLKRWDEQYGMMFHRTHEFGSGRSAGGFSNIAYGADSAPDPNDSVNHEALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKSNSTPA
Ga0224705_1080754	Ga0224705_10807541	F085224	LLEMGVPVFYPSKILLKRWHERYEMVYQRSSGERRSAGGFSNIAYGKDSAPDPNDSVNREALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLRTRARVDKIRDERWAEIRRDLTKTSSTPA
Ga0224705_1082504	Ga0224705_10825041	F085224	RFKAIVMFPYSIYSVTMLELLELGVPMFYPSKSLLKRWDGRYGMMWHRTDYYGQRKAGGFSNIAYGADSAPDPNDSVNQDALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTSSTPA
Ga0224705_1089102	Ga0224705_10891021	F085224	MFPYSIYSVTMLELLELGVPMFYPSKSLLKRWDGRYGMMWHRTDYYGQRKAGGFSNIAYGADSAPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLRTRARMDKIRDERWAEIKRDLTKTSSTPA
Ga0224705_1098934	Ga0224705_10989341	F085224	RAYLSVYRHRIRRALNGFSYRDLLRFKAIVMFPYSIWSGVMLELIEMGVPMFYPSKSLLKRWDEQYGIMFHRTHEFGSGRSAGGFSNIAYGADSAPDPNDSVNREALHYWLDKAEFYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRNERWAEIRRDLTKSNSTPA
Ga0224705_1104705	Ga0224705_11047052	F085224	KILLKRWHERYEMVYQRSSGGRRSAGGFSNIAYGADSAPDPNDGVNREALHYWLDKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTSSTPA
Ga0224705_1105239	Ga0224705_11052393	F000999	MNLEDLTKEVERIEAKSDFVVSWWAKKYKKTIRRIGNLNKEGCRVWEQGGKKYMCFWDVVIERYTTCIDPVITYKKGLN

Scaffold ID

Protein ID

Family

Sequence

Ga0224705_1005724

Ga0224705_10057242

F087060

MTQSQTTSNDTSAKQVVRTLSGITQGKPVVTGDAPQTKKFDPVADQDNRLMQMLELSLAIKDKKSEYDDLRKSFTNDLKAALDDNEENPKIRHSENDRVHVYLSKRRVYKYSDKLTAKRLKLEAQMADLKDEEAKEVRHNKAELTKETFTVSFK

Ga0224705_1028745

Ga0224705_10287451

F101313

MTSALKREFKVGDEVCHTNKFSTGNNFQRKRKGVVLGIERRPVKDGKLRTYIEVLWNTSSVPCFHASHALLHLSEREGKQEEAFHVTHVTELHNFNEHGL

Ga0224705_1035431

Ga0224705_10354311

F085224

FPYSIYSVTMLELLELGVPMFYPSKSLLKRWDGRYGMMWHRTDYYGQRKAGGFSNIAYGKDSAPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTSSTPA

Ga0224705_1064231

Ga0224705_10642312

F027869

MEHAKAKKAKGKAEKALAQMMMEAEMVKASEADLQPEDGYINPMGRIGVVRQTTYSLTNQFDGNTTQSVINPET

Ga0224705_1067503

Ga0224705_10675031

F085224

LRFKAIVMFPYSIWSGVMLELIEMGVPMFYPSKSLLKRWDEQYGMMFHRTHEFGSGRSAGGFSNIAYGADSAPDPNDSVNHEALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKSNSTPA

Ga0224705_1080754

Ga0224705_10807541

F085224

LLEMGVPVFYPSKILLKRWHERYEMVYQRSSGERRSAGGFSNIAYGKDSAPDPNDSVNREALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLRTRARVDKIRDERWAEIRRDLTKTSSTPA

Ga0224705_1082504

Ga0224705_10825041

F085224

RFKAIVMFPYSIYSVTMLELLELGVPMFYPSKSLLKRWDGRYGMMWHRTDYYGQRKAGGFSNIAYGADSAPDPNDSVNQDALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTSSTPA

Ga0224705_1089102

Ga0224705_10891021

F085224

MFPYSIYSVTMLELLELGVPMFYPSKSLLKRWDGRYGMMWHRTDYYGQRKAGGFSNIAYGADSAPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLRTRARMDKIRDERWAEIKRDLTKTSSTPA

Ga0224705_1098934

Ga0224705_10989341

F085224

RAYLSVYRHRIRRALNGFSYRDLLRFKAIVMFPYSIWSGVMLELIEMGVPMFYPSKSLLKRWDEQYGIMFHRTHEFGSGRSAGGFSNIAYGADSAPDPNDSVNREALHYWLDKAEFYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRNERWAEIRRDLTKSNSTPA

Ga0224705_1104705

Ga0224705_11047052

F085224

KILLKRWHERYEMVYQRSSGGRRSAGGFSNIAYGADSAPDPNDGVNREALHYWLDKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTSSTPA

Ga0224705_1105239

Ga0224705_11052393

F000999

MNLEDLTKEVERIEAKSDFVVSWWAKKYKKTIRRIGNLNKEGCRVWEQGGKKYMCFWDVVIERYTTCIDPVITYKKGLN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300021549: Marine sponge C. singaporensis associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - co35is 200bp no Eukaryotes last

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences