3300021548: Marine sponge Cinachyra sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', cg10ic 200bp no Eukaryotes last

Overview

Basic Information

• IMG/M Taxon OID: 3300021548
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124806 | Ga0224698
• Sample Name: Marine sponge Cinachyra sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', cg10ic 200bp no Eukaryotes last
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 89092363
• Sequencing Scaffolds: 5
• Novel Protein Genes: 6
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	5

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Cinachyra Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Upa-Upasina 'control' site, Papua New Guinea
• Coordinates
  • Lat. (^o): -9.828217
  • Long. (^o): 150.820517
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F065466	Metagenome	127	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0224698_1001111	Not Available	509
Ga0224698_1004651	Not Available	796
Ga0224698_1015984	Not Available	546
Ga0224698_1063522	Not Available	589
Ga0224698_1112691	Not Available	579

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0224698_1001111	Ga0224698_10011112	F065466	FVSFMGTNLPNHSYVDLTLVGSAVDGSDSVHCHTDLVTCCSSVQGADRGDWYFPNTMRLNFLGDPGDIHEWRGPQLVDLRRKNNSDTSGIYRCTVETNAVHSDDISDTTTRETVYAGLYASGGECALCTWREI
Ga0224698_1004651	Ga0224698_10046512	F065466	MVHCLSPGATMRATVMSVLLCLLSAVVEVHSQTVPYVSFMGANLTNHSYVDLTLVGRPEDGGDSVQCHTDLNTCCSGAQDACRGDWYFPNGSKLQFSKNPGDIYEHHEAQRIDLHRRNNGDTSGIYRCTVETNAVHSDNNSDTTTRETVYVGLYASGGEINHYCMCIVP
Ga0224698_1015984	Ga0224698_10159841	F065466	MKTIVSLLLCLLFSLVEVHSQTAPYVSFMGTILPNHSYVNLTLVGRASEGSDSVQCHTDLNTCCSGTEGADRGDWYFPNGMRLNFDGDPGKIYESRRAQRVDLRRRNNGDTSGMYRCSVETNAVHNDSGRETVYVGLYGSGGECR
Ga0224698_1063522	Ga0224698_10635221	F065466	VPYVSFMGANLPNHSYVDLTLVGNGSDSVQCHTDLVTCCSRIQGTDRGDWYFPNGERLKFSMDPGNIYESREAQRVDLRRKNNGDTSGIYRCTIDVVHSENDSKTRETVYAGLYTSRGECTHMCCSRLTHQKHSV
Ga0224698_1109095	Ga0224698_11090951	F065466	GTNLLNHSYVDLTLVRDALGGSDSVQCHTDLVTCCSSAQGADRGDWYFPNKERLNFSGDPGDIYEQREAQQVELHRRNNGDTSGIYHCTIETNAVHSDNHSDTTTRKTVYAGPH
Ga0224698_1112691	Ga0224698_11126911	F065466	KLRCYYLVTVNWSWCRMMSVTCPLLLCLLSALVEVHSQIVPYVSFMGTNLTNHSYVNLTLVGNTEGDSVQCYTDLASCCYFGQGADRGDWYFPDGHRLQYADGSGDIYENRMAQRVDLRRRNNGDTSGIHRCTIETNAVRSDDNSDTTTRETVYAGLYASGGE