3300021546: Marine sponge Cinachyra sp. associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - cg24is 200bp no Eukaryotes last

Overview

Basic Information

• IMG/M Taxon OID: 3300021546
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124747 | Ga0224702
• Sample Name: Marine sponge Cinachyra sp. associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - cg24is 200bp no Eukaryotes last
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 72821257
• Sequencing Scaffolds: 7
• Novel Protein Genes: 8
• Associated Families: 5

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	4
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → Viruses → unclassified viruses → Virus sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Cinachyra Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Upa-Upasina 'bubble' site, Papua New Guinea
• Coordinates
  • Lat. (^o): -9.8241
  • Long. (^o): 150.825833
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002192	Metagenome / Metatranscriptome	585	Y
F030459	Metagenome / Metatranscriptome	185	N
F034602	Metagenome	174	N
F065466	Metagenome	127	Y
F100995	Metagenome / Metatranscriptome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0224702_1010840	Not Available	656
Ga0224702_1023229	Not Available	561
Ga0224702_1032741	Not Available	616
Ga0224702_1044610	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	566
Ga0224702_1075248	All Organisms → cellular organisms → Bacteria	537
Ga0224702_1082489	Not Available	865
Ga0224702_1094552	All Organisms → Viruses → unclassified viruses → Virus sp.	1380

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0224702_1010840	Ga0224702_10108401	F065466	MRAIAPLLLCLLSALVEVHSQTVPYVSFMGTNLTNHSYVDLTLVGSALDGSDSVQCHTDLSTCCSGDQGDDRGDWYFPNGDRLQFNIGSIDIYEVRVAQRVDLRRRNNGTSGIHRCTIEANAVHSNDDSDPTTRETVYVGLYASGGE
Ga0224702_1023229	Ga0224702_10232292	F065466	YSSPGAFVSFMGTNLPNHSYVDLTLVGSAVDGSDSVHCHTDLVTCCSSVQGVDRGDWYFPNTMRLNFLGDPGDIHEWRGPQLVDLRRKNNSDTSGIYRCTIETNAVHSDDIIDTTTRETVYAGLYASGGECAHGEEFQ
Ga0224702_1032741	Ga0224702_10327411	F100995	MTDKQLVKRIIDLALKIKETEQLTKVSEELRTMEIEKMFTTKEGKYYTLNT
Ga0224702_1044610	Ga0224702_10446103	F034602	YDVGMTNRFKEILPPHTKEEKSYPQLISLGIMLLGILIIDIMGYYHGNMTLLEVLKNL
Ga0224702_1067563	Ga0224702_10675631	F065466	APYVSFMGTNLPNHSYVDLNLVGYALDGGDSVQCHTDLSTCCNATQGADRGDWYFPNGDRLQFSDYPGNIYERRAAQRVDLRRSYNGDTSGIYRCTVETNAVHSDDFSDNTTRETVYAGLYASGGECVHGEEFEYSQ
Ga0224702_1075248	Ga0224702_10752482	F030459	MVDIIKKRVIDWDNQLRKEKHFNEKFGTNLSPSCVKELTGSFRRLTEKSKNKIGDGTLEQCEEFYLSLDLMKQNQYIHICKNRSAAFYKIGDEPDSDKNNSDYQNDFSEWDEKLNEFKSQNGWDKFSN
Ga0224702_1082489	Ga0224702_10824891	F065466	MKATVMSVLLCLLSALVEVHSQTVPYVSFMGTNLPNHSYVDLTLVGRAEGGSDSVQCHTDLQACCSGAQGAHRGDWYFPNGDRLMFSNGPGNIYESREAQRVDLLRRNNGDTSGIYRCTIETSSVRSDNGSKTQETVYAGLYASGGECTHMCI
Ga0224702_1094552	Ga0224702_10945523	F002192	MHQVLLYFSSITAIIALFFGLYACGRVARVLSATKDLDWTAIANMTGDLASTKKTIQTLNNRINGMHSPKIAEQELMMQLLQNQGAKQNGKIVGG