3300021544: Marine sponge C. singaporensis associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - co52is 200bp no Eukaryotes last

Overview

Basic Information

• IMG/M Taxon OID: 3300021544
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124752 | Ga0224707
• Sample Name: Marine sponge C. singaporensis associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - co52is 200bp no Eukaryotes last
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 57733836
• Sequencing Scaffolds: 12
• Novel Protein Genes: 12
• Associated Families: 3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Polychaeta → Sedentaria → Scolecida → Capitellidae → Capitella → Capitella teleta	1
Not Available	9
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Coelocarteria Singaporensis (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Upa-Upasina ?bubble? site, Papua New Guinea
• Coordinates
  • Lat. (^o): -9.8241
  • Long. (^o): 150.825833
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F007475	Metagenome	350	Y
F041143	Metagenome / Metatranscriptome	160	N
F085224	Metagenome	111	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0224707_130049	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Polychaeta → Sedentaria → Scolecida → Capitellidae → Capitella → Capitella teleta	504
Ga0224707_146453	Not Available	622
Ga0224707_146846	Not Available	618
Ga0224707_148726	Not Available	747
Ga0224707_152874	Not Available	1107
Ga0224707_164104	Not Available	672
Ga0224707_171742	Not Available	564
Ga0224707_175628	Not Available	727
Ga0224707_179446	Not Available	818
Ga0224707_181160	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	610
Ga0224707_183738	Not Available	618
Ga0224707_186208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	957

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0224707_130049	Ga0224707_1300491	F085224	LLRFKAIVMFPYSVWSGVMVELLQMGVPMFYPSKSLLKRWDESYGMMFHRTNAFGERRAGGFSNIAYGKGSAPDPNDGVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTA
Ga0224707_146453	Ga0224707_1464532	F085224	MMFHRTHQFGQWRSAGGFSNIAYGADSAPDPNDSVNPDALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRNERWAEIKRDLTKTSSTPA
Ga0224707_146846	Ga0224707_1468461	F085224	QMGVPMFYPSKRLLKRWDESYGMMFHRTNAFGARRAGGLSNIAYGKGAMPDPNDGVNREALHYWLEKSEFYNWDVRYFDSPADLHEKLKAADFEAMHRDVLKTRARMDKIRDERWAEIQRDLTKTA
Ga0224707_148726	Ga0224707_1487262	F085224	DYGYRFLRIRRALQGFSYQDLTRFKAIVMFPYSTFSVVMLELIEMGVPMFYPSKRLLKRWDESYGMMFHRTNAFGERRAGGFSNIAYGADSAPDPNDSVNQDALHYWLDKAEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDARWAEIRRDLTKTNSTGV
Ga0224707_152874	Ga0224707_1528741	F085224	LLRFKAIVMFPYSVWSGVMVELLQMGVPMFYPSKSLLKRWDESYGMMFHRTNAFGERRAGGFSNVAYGKGSAPDPNDSVNREALHYWLEKSEWYNWDVRYFDSPADLHEKLKAADFEAMHRDVLKTRARMDKIRNERWAEIKRDLTKTA
Ga0224707_164104	Ga0224707_1641041	F085224	IKHPRPYLNYYRVRIRAALNGFSYQDLLRFKAIVMFPYSAFSGIMLELLEMGVPMFYPSKRLLKRWDESYGMMFQRTSGYGRRSAGGFSNIAYGKDLMPDPNDSVNREALHYWLDKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDKRWAEIKRDLTKTA
Ga0224707_171742	Ga0224707_1717422	F085224	RFKAIVMFPYSAFSGIMLELIEMGVPMFYPSKRLLKRWDERHGMMFQRTGDLAQRSAGGFSNVAHGKDLMPDPNDSVNPEALHYWLEKSEWYNWDVRYFESPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTA
Ga0224707_175628	Ga0224707_1756281	F085224	FKAVVMFPYSVFSGMMLELIQMGVPMFYPSKSLLKRWDEKYGMMFHRTNAFGERRAGGFSNIAYGANSAPDPNDSVNQEALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDARWAEIRRDLTKTSSTPA
Ga0224707_179446	Ga0224707_1794461	F085224	GFSYQDLLRFKAIVMFPYSVFSGMMLELLEMGAPMFYPSKSLLKRWDEQYGIMTQRTSAEGKRSAGGFSNVAYGKDSAPDPNDSVNRDALHYWLEKAEWYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLSKSAAT
Ga0224707_181160	Ga0224707_1811601	F007475	HNLNKNDKIQLNFTSGNAISGEYTITDVPNPNSFTVVYPFTQTTGGYVTVENLKKHEYVGAWLLEPSDKPIGKGLESWEKRWAKEKRKMQEAVEIFALYNRSTKWEGNKNIVGDFNLPQDVANFDPSVIAMTLTDSLKRDETGGLNRSGKAFNTTNRMIAMVNKLFNKAPTVLDDIKFGIVNKPLSEFTNVFEAGLLQAGDYI
Ga0224707_183738	Ga0224707_1837382	F085224	DIRRARAYFSHHRHTIRRAFQAFSYRDLLRFKAVVMFPYSVWSGVMVELLQMGVPMFYPSKRLLKRWDESYGMMFHRTSAFGERRAGGLSNIAYGKSAMPDPNDGVNREALHYWLDKSEWYNWDVRYFDSPADLHEQLKAADFEAMHRDVLRTRARMDKIRDERWAEIKRDLTKTA
Ga0224707_186208	Ga0224707_1862082	F041143	MIDNPRISGIDWQGLQKGDLVPHHQVKEFFHSIFPDKEWDDFSMVKVIDKLMKLRETINRPLIIKEVYKDQSLRVLTDKESVDYSAQQANAGIKKHRRHTRRLFTHINKDNLDPAKQRELETKQIHHAFIASAADGARKESLQLQRKGERVPKSLIEKSDFKKSS