Basic Information | |
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IMG/M Taxon OID | 3300020813 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0130338 | Gp0238878 | Ga0214086 |
Sample Name | Anaerobic digester digestate microbial community, University of Toronto, Ontario, Canada - DG078 megahit |
Sequencing Status | Permanent Draft |
Sequencing Center | University of Toronto |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 729045788 |
Sequencing Scaffolds | 24 |
Novel Protein Genes | 25 |
Associated Families | 24 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → Viruses → Predicted Viral | 1 |
All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium | 1 |
All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Velamenicoccus → Candidatus Velamenicoccus archaeovorus | 3 |
Not Available | 13 |
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia | 1 |
All Organisms → cellular organisms → Bacteria | 2 |
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Dysgonomonadaceae → Proteiniphilum | 1 |
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanofollis → Methanofollis liminatans | 1 |
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Metagenomes From Anaerobic Digester Of Solid Waste |
Type | Engineered |
Taxonomy | Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate → Metagenomes From Anaerobic Digester Of Solid Waste |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
Location Information | ||||||||
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Location | Toronto, Ontario, canada | |||||||
Coordinates | Lat. (o) | 43.5479 | Long. (o) | -79.6609 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F001564 | Metagenome / Metatranscriptome | 670 | Y |
F005744 | Metagenome / Metatranscriptome | 391 | Y |
F011397 | Metagenome / Metatranscriptome | 291 | Y |
F018007 | Metagenome / Metatranscriptome | 237 | Y |
F020177 | Metagenome / Metatranscriptome | 225 | Y |
F029455 | Metagenome / Metatranscriptome | 188 | Y |
F039153 | Metagenome / Metatranscriptome | 164 | Y |
F041155 | Metagenome | 160 | Y |
F047561 | Metagenome | 149 | Y |
F047698 | Metagenome / Metatranscriptome | 149 | N |
F053724 | Metagenome | 140 | Y |
F061015 | Metagenome | 132 | Y |
F066219 | Metagenome / Metatranscriptome | 127 | Y |
F069433 | Metagenome / Metatranscriptome | 124 | N |
F070092 | Metagenome | 123 | N |
F071210 | Metagenome / Metatranscriptome | 122 | N |
F072819 | Metagenome | 121 | N |
F078675 | Metagenome / Metatranscriptome | 116 | N |
F080820 | Metagenome / Metatranscriptome | 114 | Y |
F085739 | Metagenome / Metatranscriptome | 111 | N |
F098918 | Metagenome | 103 | Y |
F099327 | Metagenome | 103 | Y |
F103328 | Metagenome / Metatranscriptome | 101 | N |
F105265 | Metagenome / Metatranscriptome | 100 | N |
Scaffold | Taxonomy | Length | IMG/M Link |
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Ga0214086_1003585 | All Organisms → Viruses → Predicted Viral | 4468 | Open in IMG/M |
Ga0214086_1052064 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium | 1206 | Open in IMG/M |
Ga0214086_1067225 | All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Velamenicoccus → Candidatus Velamenicoccus archaeovorus | 808 | Open in IMG/M |
Ga0214086_1109544 | Not Available | 597 | Open in IMG/M |
Ga0214086_1146154 | Not Available | 571 | Open in IMG/M |
Ga0214086_1200769 | Not Available | 694 | Open in IMG/M |
Ga0214086_1233800 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia | 1925 | Open in IMG/M |
Ga0214086_1237002 | Not Available | 920 | Open in IMG/M |
Ga0214086_1241572 | Not Available | 540 | Open in IMG/M |
Ga0214086_1293299 | Not Available | 6802 | Open in IMG/M |
Ga0214086_1313140 | Not Available | 16725 | Open in IMG/M |
Ga0214086_1346666 | Not Available | 1200 | Open in IMG/M |
Ga0214086_1362921 | Not Available | 826 | Open in IMG/M |
Ga0214086_1389355 | Not Available | 878 | Open in IMG/M |
Ga0214086_1421301 | All Organisms → cellular organisms → Bacteria | 3024 | Open in IMG/M |
Ga0214086_1449634 | Not Available | 651 | Open in IMG/M |
Ga0214086_1462914 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Dysgonomonadaceae → Proteiniphilum | 1648 | Open in IMG/M |
Ga0214086_1552304 | All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanofollis → Methanofollis liminatans | 1981 | Open in IMG/M |
Ga0214086_1558883 | Not Available | 1381 | Open in IMG/M |
Ga0214086_1588246 | All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Velamenicoccus → Candidatus Velamenicoccus archaeovorus | 1166 | Open in IMG/M |
Ga0214086_1626883 | All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → Candidatus Velamenicoccus → Candidatus Velamenicoccus archaeovorus | 3185 | Open in IMG/M |
Ga0214086_1634845 | Not Available | 727 | Open in IMG/M |
Ga0214086_1637801 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium | 1202 | Open in IMG/M |
Ga0214086_1641658 | All Organisms → cellular organisms → Bacteria | 2317 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
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Ga0214086_1003585 | Ga0214086_10035856 | F098918 | IFQTALMDKMWDNQDFDKMKMQDRENMAVQCGLDLRKLIHTYTGLDTHKIEEFL |
Ga0214086_1052064 | Ga0214086_10520641 | F080820 | MDGKQKDARYERWLARAAAAYERMFCDKNQKELVTLTEREEMAVALSKELAAFLLEEHVAADPAKAPAEASLGCCPKCGQPGTPAPPKGGKRGAGMPERMVRTRAGDIDIRRERWKCGRCRIVFFSARRSPEVGHGRV |
Ga0214086_1067225 | Ga0214086_10672252 | F069433 | PVLTDLSTKVRKVHIDELRSFLNTEFVRRGLTQASFTDPTITALVTEIRKVHVDQLRTELAACKSGRGESGYCPQDGSGCMDFTDPTITALSTEVRGIHFRQMMQKVQALMTGCICETEQCQYCADCGYHYTTCSHAGVACDDHKYSECQYSINHYWNCASINLPSSAEHPYKSANPPVAWDGYVPWDWCVYTPPGSNWGTCEYSGGHNHSAWNCKCNPYSW |
Ga0214086_1109544 | Ga0214086_11095442 | F061015 | MAERKRQRQVRCENQYVQDRLSSQKMSQVYHWLVPEDPLGEPAAELALAKHEKDRSHLRASFL |
Ga0214086_1146154 | Ga0214086_11461541 | F071210 | MGLGGLNMKEKRWLGTQQKYEFHCFYCGGFHITGNCPQIVKAMNGWKYDRSCPETGHIKIVPNGDEYPTVLAFNGYHYRVVGLWGIPGRLLWLELERFYGDTIVAATFCPDELMEMDLGMSDDEQLSAWLGGLPFLSVSPRVAQVGRTDYSDASAARGE |
Ga0214086_1200769 | Ga0214086_12007691 | F105265 | MNGKKVTKAAIDRALADPVTDALSKHGITLDELARRLRQDLDRKETKILKVKGAIFDWAEYLERETAKLRGEDLPAPAVEKPYRVLASSSDETVIAIDVDSIGTQVEAREDAQKLLGLYKERLELSGPGGGPLSYDDIPAEERELLLAVTRDYERRLNEKSAKRGKAAGRKVGKTGRRTRQDRPGACESRCCL |
Ga0214086_1233800 | Ga0214086_12338003 | F039153 | MKYTVITPAATKQYNTAVLFLNNSHGARRLNFSPFHKEVKQWAKHQGYSAKLYLRSAAIECNNPDLPKESELLVVDLIQIIANGQAYLVAIDTLGPSENNLHFILEEHAKLRKAIYVTAECLDDVLCEIQDNEHNHKGVPCVPDIKSRRSFQGDYSILFSPENLTWKTARYERA |
Ga0214086_1237002 | Ga0214086_12370022 | F041155 | QVGVHRGLRADGDMSTVGFGLSALLSLGRLNLVESII |
Ga0214086_1241572 | Ga0214086_12415721 | F103328 | MFRKEDGAIDMVSLILTVVIAAVTMMVGLVVVANMESSMPDISGSALSTSLTNVMENTGTAFNFLALGLFVLAAVFIIGIVAGVLGGGQ |
Ga0214086_1266958 | Ga0214086_12669583 | F066219 | LEANMKKVFLVLLILCIGCLIHANIVEVFEAIPPVLRYAVGTVITVYALSWAYSWFFDPIIVVADTKYGAFNFGPFIVVEPCIWYSNDVEWRNTVLNHEYTHYVQHAVYGPILSVTYPILALYSNIKSGNQWDDNYWEIQAMQAPDTAPSWKPLAVWVW |
Ga0214086_1293299 | Ga0214086_12932999 | F078675 | MPDDSIYKHTPGPWSIYNHGDSNQGHYDGYLKTDIRAGAGLIHVLQSVAGNTFQRLAANVHLMAAAPSMRDALWAIANMQVKEETDKGEALALCMSIARLELEKCSTAGK |
Ga0214086_1313140 | Ga0214086_131314016 | F047561 | MTVSNIEPQNIVPDFGTLKRGKLDILVNWNITSATKTDDMGNEYTEWQYESVRINWVLPAVYESEAAIQAYLNANYDEGENILGWAQATRVSKSSVGT |
Ga0214086_1346666 | Ga0214086_13466661 | F047698 | MQQATAIVGVLIGFLILTQIGIFVCDAMIEASSVNESSQLYEAQTEAINTFVQCLSIVRILLIVAIVAVVFQYLQGAGLIPGF |
Ga0214086_1362921 | Ga0214086_13629213 | F011397 | PVSQYERFCDGYDYILKNSSAEERLEWGINDDELQRTIKPGEKYIYQVAKEGREFKIMSICFANYVIIRKKIFKFEDD |
Ga0214086_1389355 | Ga0214086_13893552 | F099327 | MATEGFFQGTSGEEISLLVDGVKIMALQNLSWKASQSKSPIRGAGYRKPHAMGRAFKEYEVDFEVKELNKAVIEEGVNSRRSREVQIKTFKIGDQEFSDLLDLRNCTILIVYPPKNNATRIIRFLGFEFTDVEGGFSIDDESVGRKLSGIALDAEGLV |
Ga0214086_1421301 | Ga0214086_14213013 | F001564 | LCDPRLCPDAPEDGGRCDHCPLDKLDAAQSSETGLLIRRALDLRAALKLGVRISLEEIGADEFYAMLILEEERERLDAERVNRERS |
Ga0214086_1449634 | Ga0214086_14496341 | F053724 | IRVLVTLQVDECEPDAKIDRETMEDAAVEAVENAVRFAYDNGFSHTYADELSIGFVDAVLYEEDLDDEDLDGN |
Ga0214086_1462914 | Ga0214086_14629141 | F070092 | MAINDRLKPVAELLETNRQKIDLMISQRMASDLAIEKRKKELYDEVMAAKEKAFKDELADLEGEIRKIEDSYREPKKDPTTKLLEFEQIKAKIRSTPSKELKELTHKFQNTGAIPGIPWERPDHVDVLVAELRNRGLDEEADLTWDYAYNKLKVDRPWENNPLYKQLKSQHNKVSVLAGFKDMLKYLDGTNNAVYISETLKYKEE |
Ga0214086_1552304 | Ga0214086_15523043 | F085739 | MREIPIAGETCCANCVHDATCSHRSALPGIALICDHFVNRTFPPEVQDAIQAGACCHICGAPAIIGGGGRVTCGNCLLAQAAAKAKIGDKIIKEWRGTVTTPPAPMFEAGADPDEVEE |
Ga0214086_1558883 | Ga0214086_15588832 | F029455 | MRTIDLDLWAEGAAERLPKITITAQGLRFQGEDPEFDRLCLILGGWLKQ |
Ga0214086_1588246 | Ga0214086_15882461 | F072819 | MCRGIGVCIRLPDRTGERVSIQAGITTARGIANVTLIHGEEMFQDQVKAQEVSFRIARIEGENAVSELVNWCRNNLDELTVQCFTHKRFMSVQALVDTLCEVYRDLGVEGDKGNVSVFVLFLAGKHRDKIYASHVVELNDTHRQILRDKLGLDIEEIEPGLSKLDWRTDAGI |
Ga0214086_1626883 | Ga0214086_16268831 | F072819 | MVMGMFQDQTKAQEVSFRIARLEGENAVSELVNWCRNNLDELTVQCFTHKRFMSVQALVDVLCEIYRDLGVEGDKGNVSAFVLFLAGKHRDKIYASHVVELNDTHRQILRDKLGLDIEEIEPGLSKLDWRTDAGI |
Ga0214086_1634845 | Ga0214086_16348451 | F005744 | MDDETFEIIKAGAPDAPPEQALYRIQQTYPDGSGGRLNIDWEGLLWLHELIHDRIALEGYVCETCDTKGCHRPATWEIECRGVGVSGRPIYSCDEH |
Ga0214086_1637801 | Ga0214086_16378011 | F020177 | MDNIDLNNTYWERLRGFVTELRVDARWILRQNNSDKPLGSLRIVSHPDLQPGFLRAFFMCVTSIRKKNVGEKIKTIEDFQMEETELEVYSVDDKIETDSFIQEASFKELEGMFGVKIFE |
Ga0214086_1641658 | Ga0214086_16416583 | F018007 | MFNGWKITNILDVGLCELDTADGPYNKTGYRREHREDGFAITVGLMEYISGWSALEILYWLHEKQAIPRRYDNARRQ |
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