Basic Information | |
---|---|
IMG/M Taxon OID | 3300019079 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0117946 | Gp0216956 | Ga0193099 |
Sample Name | Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_039 - TARA_N000000052 (ERX1782316-ERR1711880) |
Sequencing Status | Permanent Draft |
Sequencing Center | Canada's Michael Smith Genome Sciences Centre |
Published? | N |
Use Policy | Open |
Dataset Contents | |
---|---|
Total Genome Size | 19193277 |
Sequencing Scaffolds | 10 |
Novel Protein Genes | 11 |
Associated Families | 10 |
Dataset Phylogeny | |
---|---|
Taxonomy Groups | Number of Scaffolds |
All Organisms → Viruses → Predicted Viral | 3 |
Not Available | 4 |
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45 | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae | 1 |
All Organisms → cellular organisms → Eukaryota → Sar | 1 |
Ecosystem Assignment (GOLD) | |
---|---|
Name | Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Type | Environmental |
Taxonomy | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Alternative Ecosystem Assignments | |
---|---|
Environment Ontology (ENVO) | marine biome → marine water body → sea water |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
Location Information | ||||||||
---|---|---|---|---|---|---|---|---|
Location | Indian Ocean: TARA_039 | |||||||
Coordinates | Lat. (o) | 18.5745 | Long. (o) | 66.4895 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map | ||||||||
| ||||||||
Zoom: | Powered by OpenStreetMap © |
⦗Top⦘ |