3300017828: Saline water viral communities from hypersaline pond near village of Ngallou, Senegal ? P8

Overview

Basic Information

• IMG/M Taxon OID: 3300017828
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0129073 | Gp0214344 | Ga0189787
• Sample Name: Saline water viral communities from hypersaline pond near village of Ngallou, Senegal ? P8
• Sequencing Status: Permanent Draft
• Sequencing Center: GATC-Biotech AG, Konstanz, Germany
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 7736569
• Sequencing Scaffolds: 9
• Novel Protein Genes: 9
• Associated Families: 4

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum aethiopicum	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Pyrstoviridae → Hatrivirus → Hatrivirus HATV3	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1
All Organisms → Viruses → Predicted Viral	2
All Organisms → Viruses	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Natrarchaeobius → Natrarchaeobius chitinivorans	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Archevir - Metagenome And Diversity Of Hyperhalophilic Archaeoviruses
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline → Unclassified → Saline Water → Archevir - Metagenome And Diversity Of Hyperhalophilic Archaeoviruses

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → pond → hypersaline water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Location: village of Ngallou, Senegal
• Coordinates
  • Lat. (^o): 14.0491
  • Long. (^o): -16.7624
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F020468	Metagenome / Metatranscriptome	224	Y
F062484	Metagenome	130	Y
F079661	Metagenome	115	Y
F098766	Metagenome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0189787_10071	Not Available	10739
Ga0189787_10536	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum aethiopicum	3549
Ga0189787_11143	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Pyrstoviridae → Hatrivirus → Hatrivirus HATV3	1951
Ga0189787_11514	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1516
Ga0189787_11591	All Organisms → Viruses → Predicted Viral	1449
Ga0189787_11664	All Organisms → Viruses → Predicted Viral	1395
Ga0189787_12395	All Organisms → Viruses	917
Ga0189787_12897	Not Available	659
Ga0189787_12919	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Natrarchaeobius → Natrarchaeobius chitinivorans	651

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0189787_10071	Ga0189787_1007117	F062484	MYLIGSKSKVQTYIAKVDKHEGFTGDITKTWAEPRKHPSKELYAVQKNMSVEPDSNLEEKEELPSDWQAELK
Ga0189787_10536	Ga0189787_105365	F098766	CGGEADGAHHVKVEVERIPPEEPPKTYYFHHTCFENSQSWERGL
Ga0189787_11143	Ga0189787_111433	F079661	MSKTTIEIPKDTRDRLREERASHESNYGETIDRLLDSGDGGQLWTEQEIRAIASDEVERAATRR
Ga0189787_11514	Ga0189787_115143	F098766	MSHPTCAVCGFETDGDDHVRVKVERVPPEDPPERYYFHKTCFARTQDWQQG
Ga0189787_11591	Ga0189787_115912	F079661	MSDTTTIQIPTDLRKRLKDERLPHESNYGDTIERLLDDSTGGQLWTEQEIKDLIDRRISQAQRH
Ga0189787_11664	Ga0189787_116641	F098766	MTHPTCAVCGFEADGADHVRVEVERVPPEEPAVTYHFHKRCFDRCQDWEQG
Ga0189787_12395	Ga0189787_123953	F079661	MTRTTIELPESTRDRLKEERKPHESNYGDTIERLLNEGSGGQLWTEQEIQDLIQREIEQVSRR
Ga0189787_12897	Ga0189787_128971	F020468	MPLVKKQITLADGATSDQVLTGTTYEYVGPGTRLVVAAASDDAGVSMNFNVNNAEFARDAEVSEKVTGEPFGWKGGYVMNDMVTTAAERNRPIITFTNNSGASRTIDVAVFIGG
Ga0189787_12919	Ga0189787_129191	F098766	MSHPTCAVCGFEADGADHVRVEVERVPPERPPKIYHFHTRCFDRCQ