Basic Information | |
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IMG/M Taxon OID | 3300017827 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0129073 | Gp0214345 | Ga0189788 |
Sample Name | Saline water viral communities from hypersaline pond near village of Ngallou, Senegal ? P9 |
Sequencing Status | Permanent Draft |
Sequencing Center | GATC-Biotech AG, Konstanz, Germany |
Published? | Y |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 1892334 |
Sequencing Scaffolds | 1 |
Novel Protein Genes | 2 |
Associated Families | 2 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
Not Available | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Archevir - Metagenome And Diversity Of Hyperhalophilic Archaeoviruses |
Type | Environmental |
Taxonomy | Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Saline Water → Archevir - Metagenome And Diversity Of Hyperhalophilic Archaeoviruses |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | aquatic biome → pond → hypersaline water |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Hypersaline (saline) |
Location Information | ||||||||
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Location | village of Ngallou, Senegal | |||||||
Coordinates | Lat. (o) | 14.0491 | Long. (o) | -16.7624 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F020468 | Metagenome / Metatranscriptome | 224 | Y |
F057206 | Metagenome / Metatranscriptome | 136 | Y |
Scaffold | Taxonomy | Length | IMG/M Link |
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Ga0189788_1145 | Not Available | 3695 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
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Ga0189788_1145 | Ga0189788_11454 | F020468 | MPLVKKQITVADGATSDQILAGTTYEYVGPGTRLVVAAAADDAGVSMNFNVNNAEFARDAEVSEKVTGEPFGWKGGYVMNDMVTTAAERNRPIITFTNNSGASRTIDVAVFIGG |
Ga0189788_1145 | Ga0189788_11456 | F057206 | MNYVIYVLCFFTIVNIFMCSIAIARVAEFKKSVAGLDWEAVATLLGDVATVKRSITRLNGRLNGMDNAQPNFDWKDQAAQVLNAPKQPATRGG |
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