3300017825: Saline water viral communities from hypersaline pond near village of Ngallou, Senegal ? P7

Overview

Basic Information

• IMG/M Taxon OID: 3300017825
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0129073 | Gp0214343 | Ga0189786
• Sample Name: Saline water viral communities from hypersaline pond near village of Ngallou, Senegal ? P7
• Sequencing Status: Permanent Draft
• Sequencing Center: GATC-Biotech AG, Konstanz, Germany
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 3272754
• Sequencing Scaffolds: 6
• Novel Protein Genes: 6
• Associated Families: 4

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → Viruses → Predicted Viral	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	2
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Archevir - Metagenome And Diversity Of Hyperhalophilic Archaeoviruses
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Saline Water → Archevir - Metagenome And Diversity Of Hyperhalophilic Archaeoviruses

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → pond → hypersaline water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Location: village of Ngallou, Senegal
• Coordinates
  • Lat. (^o): 14.0491
  • Long. (^o): -16.7624
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F041612	Metagenome	159	N
F079661	Metagenome	115	Y
F096726	Metagenome	104	N
F098766	Metagenome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0189786_10010	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	19183
Ga0189786_10277	All Organisms → Viruses → Predicted Viral	2997
Ga0189786_10436	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	2177
Ga0189786_10455	All Organisms → Viruses → Predicted Viral	2077
Ga0189786_10867	Not Available	1151
Ga0189786_10878	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1138

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0189786_10010	Ga0189786_1001013	F079661	MNKTTIEIPEDTRDRLREERASHESNYGETIDRLLGNADGGQLWTEQEIRDLARDEAESLARR
Ga0189786_10277	Ga0189786_102776	F096726	MTRDDWIDPTNTEASIREHVERLARGDRLDVDTPTGTEQIERRGPEWRLTHLGTGGGWCWAERMDTRQLVDYLTQWRSREGFDPITVRFVEDGGEQ
Ga0189786_10436	Ga0189786_104363	F098766	MTHPTCAVCGFEADGADHVRVEVERVPPERPPKIYHFHTRCFDRCQDWERD
Ga0189786_10455	Ga0189786_104552	F096726	MTRDEWIDPADTEASIREHVERLARGDRLDVDTPTGTERIERRGPEWRLTHLGTGGGWCWSERMDTRQLVDYLTQWRSREGFDPITVRFVKDGGE
Ga0189786_10867	Ga0189786_108673	F041612	RDLLTADAVTAATVRDGATLEVRAGLRVRDGDGVVARARATDTAPLAVTQAVDPAAHGTVGGAGGVTIETG
Ga0189786_10878	Ga0189786_108782	F098766	MSHPTCAVCGHQADAADHVRVEVERVPPEEPPTIYYFHKRCFDRCQDWEQG