Basic Information | |
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IMG/M Taxon OID | 3300017508 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0128947 | Gp0212192 | Ga0186480 |
Sample Name | Metatranscriptome of marine eukaryotic communities from Baltic Sea in f/2 medium with sea water w/o silica, 3 C, 30 psu salinity and 302 ?mol photons light - Scrippsiella Hangoei SHTV-5 (MMETSP0361) |
Sequencing Status | Permanent Draft |
Sequencing Center | National Center for Genome Resources |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 106054104 |
Sequencing Scaffolds | 27 |
Novel Protein Genes | 43 |
Associated Families | 30 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae | 8 |
All Organisms → cellular organisms → Eukaryota → Sar | 6 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata | 7 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium | 2 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Peridiniales → Endodiniaceae → Brandtodinium → Brandtodinium nutricula | 2 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium monilatum | 1 |
Ecosystem Assignment (GOLD) | |
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Name | The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp) |
Type | Host-Associated |
Taxonomy | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp) |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | marine biome → marine water body → eutrophic water |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
Location Information | ||||||||
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Location | Baltic Sea | |||||||
Coordinates | Lat. (o) | 59.51 | Long. (o) | 23.13 | Alt. (m) | N/A | Depth (m) | 40 |
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