Basic Information | |
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IMG/M Taxon OID | 3300017491 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0128947 | Gp0212388 | Ga0186676 |
Sample Name | Metatranscriptome of coastal eukaryotic communities from North Sea in half strength K medium with seawater and selenite, 20 C, 32 psu salinity and 293 ?mol photons light - Azadinium spinosum 3D9 (MMETSP1036_2) |
Sequencing Status | Permanent Draft |
Sequencing Center | National Center for Genome Resources |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 80155197 |
Sequencing Scaffolds | 39 |
Novel Protein Genes | 48 |
Associated Families | 34 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Eukaryota | 6 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae | 7 |
Not Available | 2 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Lingulodiniaceae → Lingulodinium → Lingulodinium polyedra | 1 |
All Organisms → cellular organisms → Eukaryota → Sar | 17 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium andersonii | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Peridiniales → Endodiniaceae → Brandtodinium → Brandtodinium nutricula | 1 |
Ecosystem Assignment (GOLD) | |
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Name | The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp) |
Type | Host-Associated |
Taxonomy | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp) |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | marine biome → coastal water body → coastal sea water |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
Location Information | ||||||||
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Location | North Sea | |||||||
Coordinates | Lat. (o) | 57.0525 | Long. (o) | 2.50056 | Alt. (m) | N/A | Depth (m) | N/A |
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