Sample 3300017306

Overview

Basic Information
IMG/M Taxon OID	3300017306 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128947 \| Gp0212198 \| Ga0186486
Sample Name	Metatranscriptome of marine eukaryotic communities from Baffin Bay in ProV 50 medium with seawater and antibiotics, 6 C, 32 psu salinity and 184 ?mol photons light - unclassified eukaryote CCMP 2293 (MMETSP0986)
Sequencing Status	Permanent Draft
Sequencing Center	National Center for Genome Resources
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	40073030
Sequencing Scaffolds	13
Novel Protein Genes	13
Associated Families	11

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Cryptophyceae	11
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae	1
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Atlantic Ocean: Baffin Bay
Coordinates	Lat. (^o)	78.5922	Long. (^o)	-74.4922	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F010032	Metagenome / Metatranscriptome	309	N
F019282	Metagenome / Metatranscriptome	230	Y
F020015	Metagenome / Metatranscriptome	226	N
F026478	Metagenome / Metatranscriptome	197	Y
F032673	Metagenome / Metatranscriptome	179	Y
F036560	Metagenome / Metatranscriptome	169	N
F054914	Metagenome / Metatranscriptome	139	N
F084315	Metagenome / Metatranscriptome	112	N
F087277	Metagenome / Metatranscriptome	110	N
F101267	Metagenome / Metatranscriptome	102	N
F101269	Metagenome / Metatranscriptome	102	N

Family

Category

Number of Sequences

3D Structure?

F010032

Metagenome / Metatranscriptome

309

F019282

Metagenome / Metatranscriptome

230

F020015

Metagenome / Metatranscriptome

226

F026478

Metagenome / Metatranscriptome

197

F032673

Metagenome / Metatranscriptome

179

F036560

Metagenome / Metatranscriptome

169

F054914

Metagenome / Metatranscriptome

139

F084315

Metagenome / Metatranscriptome

112

F087277

Metagenome / Metatranscriptome

110

F101267

Metagenome / Metatranscriptome

102

F101269

Metagenome / Metatranscriptome

102

Scaffold	Taxonomy	Length	IMG/M Link
Ga0186486_108266	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	1247	Open in IMG/M
Ga0186486_109754	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	1133	Open in IMG/M
Ga0186486_109785	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	1131	Open in IMG/M
Ga0186486_112178	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	981	Open in IMG/M
Ga0186486_113516	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	913	Open in IMG/M
Ga0186486_113554	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	911	Open in IMG/M
Ga0186486_113646	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae	906	Open in IMG/M
Ga0186486_114061	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	883	Open in IMG/M
Ga0186486_115272	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	824	Open in IMG/M
Ga0186486_116793	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	758	Open in IMG/M
Ga0186486_120842	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	619	Open in IMG/M
Ga0186486_122166	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales	581	Open in IMG/M
Ga0186486_125167	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	507	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0186486_108266

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

1247

Open in IMG/M

Ga0186486_109754

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

1133

Open in IMG/M

Ga0186486_109785

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

1131

Open in IMG/M

Ga0186486_112178

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

981

Open in IMG/M

Ga0186486_113516

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

913

Open in IMG/M

Ga0186486_113554

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

911

Open in IMG/M

Ga0186486_113646

All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae

906

Open in IMG/M

Ga0186486_114061

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

883

Open in IMG/M

Ga0186486_115272

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

824

Open in IMG/M

Ga0186486_116793

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

758

Open in IMG/M

Ga0186486_120842

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

619

Open in IMG/M

Ga0186486_122166

All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales

581

Open in IMG/M

Ga0186486_125167

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

507

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0186486_108266	Ga0186486_1082661	F084315	KMANSYGSVALGEAPRQRARTPMIALGLAALAVLVTVAVVSTGSAEKPAELLTQELVLFKMEPPPKPWSPPENLWMYWGGSPNKRFGHSGDNMRHLVKLGRLAGGEYRDPHFLFDYGAQTFRDLSEQCCTAIIVPPMKNSMPIYNAQASVAQRLRNYVANGNHMVFTGGSLLSIEFINRYFYFNIEPIAQSGVFKGSGYGNYSPGPFRKLINDDLPWVYKLAPDTLYQDYTSVQSMDLRSLPSGTTVLYMTPKSSPVFAIKFCQRLSERHGETPIKTVPRDCWRHAARGYPCSCGTITYIGYDWHYDQTAADWDKVLLAAVEFQNDPDMSATNSPNCKAKPVVEVDPHAPLAPPKCQTYE
Ga0186486_109754	Ga0186486_1097541	F010032	RDRIGNQIMLRVLNTVTVCLALGLCALAGWQIQNPATFELVSKSPAAAIQQTTELSFLQTSSFVDQVYLYAGLAVDNKHETGFIAKEIRKHNYQTQIRLFTSLDDATVRAVLWDQGVHCLVWPPFVRYPGISETAKTDLRAYAAAGNNVVFMGNYVAVQFMNDVFGFQLTDDYQNGPYYRNDRNVRNTPFQFLPSRVEQASIETYAVKTRSLPPGGKSMLDSLGATQAFVIRYDLGTVCYIGYNYNTPFHADQWTRVLHCAIDM
Ga0186486_109785	Ga0186486_1097851	F020015	GACGVRRSPKMGAEYLVAPDPHRSANRPSDSYYAKRAFLVAVVVAAVVCGVLLAAPRPVGEGGDAALAGSYYAVTKPPAFNFNRFIRHAWFYDGRSVAGDQEVFLEKMAKTHHYKLQIHKLRSFRDSEFRAALFSESIHCIVFPPLLKFPGISELAKKDFRGYISSGNNAVFIGSYEWLSVMNDVFGFQLMSDYKDGPYYRNDRNVRGTPFQWSMHRLEQPDGSVYGVKVNSIPMDGKCMFDTMGACVVFYVKYNLGTIVYIAFDYDTPYGADKWTQILHAGMMM
Ga0186486_112178	Ga0186486_1121781	F020015	STMASTGSPPLALYGAVVTKPDGAGRRLRIVAVACVVALAVVCGVLLAVHTTDQEAGSQSLAGAYYAVAKPPAFNFNRFIKHAWFYNGHAVNPESELLVEKLAKKHHYKLEIHHLRTLKDNEFRAALFSEEVHCMVFAPLEHFPGFSELARTDLRGYVSAGNNVVFVGSYEYLSVMNDVFGFGLMSAYADGPYYRNDRTVRGTPFQWSMSRLEQPDGSVYGVKVDSIPMDGNCMFDTMRVCVAFYVKYNLGTIVYLAFDYDQPNVGHWDQILHAAMMM
Ga0186486_113516	Ga0186486_1135161	F019282	MFAILSYVNTINEWAEPRNAEGVTANTVIDSNDEPPCNNQQRMTIRGY
Ga0186486_113554	Ga0186486_1135541	F087277	GAQMAAGFSPMVGSFQPAASSNSALETRRRIRNAFLLVAATSCVLVACCVVLEGNTAAAPRPVSVSEHWLEDGRASLSMFRVARTPMQKKAIRGDPLPHQVHYYSNVGDRLPVLGDEERETRQTFQELVQLAHTCNVLLRRAIWSVDPTVFNPQYNLQVRLDSIHTALGQLARQTGVYLTNPPVVQVDDSVFDEAAADVSRFRKLVERIPEMHNAQYGWVVQYTLIRTQLRKVSSQLTATVNIAKHHFLEVADSIDSMRLNVEAIHEGR
Ga0186486_113646	Ga0186486_1136461	F010032	RSTKSQEMLDTARGLNTAVLCAALLAVCVAGWHMNSAGQSELFQTSVEAVPQQTTELSFLQTSSFVDQVYLYAGLAVDNKHETGFIAKEIRKHNYQTQIRLFTSLDDATVRAVLWDQGVHCLVWPPFVRYPGISETAKTDLRAYAAAGNNVVFMGNYVAVQFMNDVFGFQLTDDYQNGPYYRNDRNVRNTPYQFLPSRVEQASIETYAVKTRSLPPGGKSMLDTLGATVAFVIRYDLGTVCYIGYNYNTPFHADQWTRVLHCAIDM
Ga0186486_114061	Ga0186486_1140611	F032673	FFIWKMADYGSLPAAVEGAPVHPRRRAALLFAGVAALAAVAVLGCVFLVNQDDGMTTLAALNQQEMNAILSKASSMSTQQLSAEVSRLEMSKSLKSVKAVRMQSLVSQNSAANPEGGIYEDVPATVVGPIPGPPDWNGASAVVARLPNIGFAPSMLTEKGVETRGSFTARKSRAGESFYLRIYGKLNHNMRCTLRGYRNLMGDFTGNTIYTGYKKIYIGKSQMQTQHIPRGIVGEFDIMTCRDMGNGEVQYFRIRYA
Ga0186486_115272	Ga0186486_1152721	F101267	AQRATDWWVCAPAVSRRDYRHIKMGCCSSRAPGSHEWQAQVPGSFKANPIPTVNKKQAIPADFFQKCYMKGYLRTLPKKQRIWCMIHENNFYFMDSAEDTEPRKFFCFDGCLVNLKGKELEIQTAELMGGSVPRATYKFVAEGPDEEKALEWYEASLKASSRRN
Ga0186486_116793	Ga0186486_1167931	F026478	EMAGARHFLPLAALLVLLATTTSAAKPKRKTVSVTDEEVVKARDFALAEIVKLSDSYRDMKINTVSTAETARSAFADGTNYFLKMELECTSLCAAPLSPASTCRRGHYKGVNEIIVFEKDDGHYDGIAIDEFPQMDGEYHPCTPSYKGPEKCDPAEHRTPEQAALFLDDDEDEAGGKTEL
Ga0186486_120842	Ga0186486_1208421	F101269	LDSVSIPAGHVGGGTLVAKCHSTAKGAPPTAKVNGWGPYFANDSHGYIAYGTGEYDGQGSGHSFGGDIWHPSHGYNNNCDGGRSHWSCDFRQA
Ga0186486_122166	Ga0186486_1221661	F036560	AAVGLFLPQEEAIAMLTEQLYGKHAAALYAQAADFNKTARFYYMKAQDAYYLANAQASYDDWRRARRQWDYFYRRK
Ga0186486_125167	Ga0186486_1251671	F054914	TLGAEETFLKMQYGSAPNVAPVRKTANLALAFALIAAALVCAVGIVSYAKASNSLSPISTLTTKLGSEYMVANALVAHATDMSFDENAPVPEHLADLAKAAEDEMKIDAEVMGTR

Scaffold ID

Protein ID

Family

Sequence

Ga0186486_108266

Ga0186486_1082661

F084315

KMANSYGSVALGEAPRQRARTPMIALGLAALAVLVTVAVVSTGSAEKPAELLTQELVLFKMEPPPKPWSPPENLWMYWGGSPNKRFGHSGDNMRHLVKLGRLAGGEYRDPHFLFDYGAQTFRDLSEQCCTAIIVPPMKNSMPIYNAQASVAQRLRNYVANGNHMVFTGGSLLSIEFINRYFYFNIEPIAQSGVFKGSGYGNYSPGPFRKLINDDLPWVYKLAPDTLYQDYTSVQSMDLRSLPSGTTVLYMTPKSSPVFAIKFCQRLSERHGETPIKTVPRDCWRHAARGYPCSCGTITYIGYDWHYDQTAADWDKVLLAAVEFQNDPDMSATNSPNCKAKPVVEVDPHAPLAPPKCQTYE

Ga0186486_109754

Ga0186486_1097541

F010032

RDRIGNQIMLRVLNTVTVCLALGLCALAGWQIQNPATFELVSKSPAAAIQQTTELSFLQTSSFVDQVYLYAGLAVDNKHETGFIAKEIRKHNYQTQIRLFTSLDDATVRAVLWDQGVHCLVWPPFVRYPGISETAKTDLRAYAAAGNNVVFMGNYVAVQFMNDVFGFQLTDDYQNGPYYRNDRNVRNTPFQFLPSRVEQASIETYAVKTRSLPPGGKSMLDSLGATQAFVIRYDLGTVCYIGYNYNTPFHADQWTRVLHCAIDM

Ga0186486_109785

Ga0186486_1097851

F020015

GACGVRRSPKMGAEYLVAPDPHRSANRPSDSYYAKRAFLVAVVVAAVVCGVLLAAPRPVGEGGDAALAGSYYAVTKPPAFNFNRFIRHAWFYDGRSVAGDQEVFLEKMAKTHHYKLQIHKLRSFRDSEFRAALFSESIHCIVFPPLLKFPGISELAKKDFRGYISSGNNAVFIGSYEWLSVMNDVFGFQLMSDYKDGPYYRNDRNVRGTPFQWSMHRLEQPDGSVYGVKVNSIPMDGKCMFDTMGACVVFYVKYNLGTIVYIAFDYDTPYGADKWTQILHAGMMM

Ga0186486_112178

Ga0186486_1121781

F020015

STMASTGSPPLALYGAVVTKPDGAGRRLRIVAVACVVALAVVCGVLLAVHTTDQEAGSQSLAGAYYAVAKPPAFNFNRFIKHAWFYNGHAVNPESELLVEKLAKKHHYKLEIHHLRTLKDNEFRAALFSEEVHCMVFAPLEHFPGFSELARTDLRGYVSAGNNVVFVGSYEYLSVMNDVFGFGLMSAYADGPYYRNDRTVRGTPFQWSMSRLEQPDGSVYGVKVDSIPMDGNCMFDTMRVCVAFYVKYNLGTIVYLAFDYDQPNVGHWDQILHAAMMM

Ga0186486_113516

Ga0186486_1135161

F019282

MFAILSYVNTINEWAEPRNAEGVTANTVIDSNDEPPCNNQQRMTIRGY

Ga0186486_113554

Ga0186486_1135541

F087277

GAQMAAGFSPMVGSFQPAASSNSALETRRRIRNAFLLVAATSCVLVACCVVLEGNTAAAPRPVSVSEHWLEDGRASLSMFRVARTPMQKKAIRGDPLPHQVHYYSNVGDRLPVLGDEERETRQTFQELVQLAHTCNVLLRRAIWSVDPTVFNPQYNLQVRLDSIHTALGQLARQTGVYLTNPPVVQVDDSVFDEAAADVSRFRKLVERIPEMHNAQYGWVVQYTLIRTQLRKVSSQLTATVNIAKHHFLEVADSIDSMRLNVEAIHEGR

Ga0186486_113646

Ga0186486_1136461

F010032

RSTKSQEMLDTARGLNTAVLCAALLAVCVAGWHMNSAGQSELFQTSVEAVPQQTTELSFLQTSSFVDQVYLYAGLAVDNKHETGFIAKEIRKHNYQTQIRLFTSLDDATVRAVLWDQGVHCLVWPPFVRYPGISETAKTDLRAYAAAGNNVVFMGNYVAVQFMNDVFGFQLTDDYQNGPYYRNDRNVRNTPYQFLPSRVEQASIETYAVKTRSLPPGGKSMLDTLGATVAFVIRYDLGTVCYIGYNYNTPFHADQWTRVLHCAIDM

Ga0186486_114061

Ga0186486_1140611

F032673

FFIWKMADYGSLPAAVEGAPVHPRRRAALLFAGVAALAAVAVLGCVFLVNQDDGMTTLAALNQQEMNAILSKASSMSTQQLSAEVSRLEMSKSLKSVKAVRMQSLVSQNSAANPEGGIYEDVPATVVGPIPGPPDWNGASAVVARLPNIGFAPSMLTEKGVETRGSFTARKSRAGESFYLRIYGKLNHNMRCTLRGYRNLMGDFTGNTIYTGYKKIYIGKSQMQTQHIPRGIVGEFDIMTCRDMGNGEVQYFRIRYA

Ga0186486_115272

Ga0186486_1152721

F101267

AQRATDWWVCAPAVSRRDYRHIKMGCCSSRAPGSHEWQAQVPGSFKANPIPTVNKKQAIPADFFQKCYMKGYLRTLPKKQRIWCMIHENNFYFMDSAEDTEPRKFFCFDGCLVNLKGKELEIQTAELMGGSVPRATYKFVAEGPDEEKALEWYEASLKASSRRN

Ga0186486_116793

Ga0186486_1167931

F026478

EMAGARHFLPLAALLVLLATTTSAAKPKRKTVSVTDEEVVKARDFALAEIVKLSDSYRDMKINTVSTAETARSAFADGTNYFLKMELECTSLCAAPLSPASTCRRGHYKGVNEIIVFEKDDGHYDGIAIDEFPQMDGEYHPCTPSYKGPEKCDPAEHRTPEQAALFLDDDEDEAGGKTEL

Ga0186486_120842

Ga0186486_1208421

F101269

LDSVSIPAGHVGGGTLVAKCHSTAKGAPPTAKVNGWGPYFANDSHGYIAYGTGEYDGQGSGHSFGGDIWHPSHGYNNNCDGGRSHWSCDFRQA

Ga0186486_122166

Ga0186486_1221661

F036560

AAVGLFLPQEEAIAMLTEQLYGKHAAALYAQAADFNKTARFYYMKAQDAYYLANAQASYDDWRRARRQWDYFYRRK

Ga0186486_125167

Ga0186486_1251671

F054914

TLGAEETFLKMQYGSAPNVAPVRKTANLALAFALIAAALVCAVGIVSYAKASNSLSPISTLTTKLGSEYMVANALVAHATDMSFDENAPVPEHLADLAKAAEDEMKIDAEVMGTR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300017306: Metatranscriptome of marine eukaryotic communities from Baffin Bay in ProV 50 medium with seawater and antibiotics, 6 C, 32 psu salinity and 184 ?mol photons light - unclassified eukaryote CCMP 2293 (MMETSP0986)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences