3300014572: Human fecal microbial communities from obese patients in Germany - AS65_6

Overview

Basic Information

• IMG/M Taxon OID: 3300014572
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0121297 | Gp0151629 | Ga0134457
• Sample Name: Human fecal microbial communities from obese patients in Germany - AS65_6
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Hohenheim
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 112530702
• Sequencing Scaffolds: 10
• Novel Protein Genes: 25
• Associated Families: 25

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → environmental samples → Firmicutes bacterium CAG:170	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Human Fecal Microbial Communities From Obese Patients In Germany
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Obese Patients In Germany

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal distal gut

Location Information

• Location: Germany
• Coordinates
  • Lat. (^o): N/A
  • Long. (^o): N/A
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F032286	Metagenome / Metatranscriptome	180	Y
F042095	Metagenome	159	N
F047126	Metagenome	150	N
F050794	Metagenome	145	N
F057001	Metagenome	137	Y
F058555	Metagenome	135	N
F064725	Metagenome	128	N
F068855	Metagenome	124	N
F074899	Metagenome / Metatranscriptome	119	N
F076064	Metagenome	118	N
F076653	Metagenome	118	N
F077313	Metagenome	117	N
F078006	Metagenome	117	N
F081354	Metagenome	114	Y
F083451	Metagenome	113	N
F083452	Metagenome	113	N
F085718	Metagenome	111	N
F088920	Metagenome	109	Y
F089590	Metagenome	109	N
F089591	Metagenome	109	N
F093883	Metagenome	106	N
F098313	Metagenome	104	N
F101193	Metagenome	102	N
F105374	Metagenome	100	N
F106193	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0134457_1000016	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	156797
Ga0134457_1000201	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	45289
Ga0134457_1000470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	22916
Ga0134457_1000742	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	15554
Ga0134457_1002475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5164
Ga0134457_1003410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	3928
Ga0134457_1007406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2032
Ga0134457_1015694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1075
Ga0134457_1018922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → environmental samples → Firmicutes bacterium CAG:170	919
Ga0134457_1035598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	548

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0134457_1000016	Ga0134457_1000016132	F083451	MDKSEKEKQILDLLMSRKDIRKLVEKSNECYSKMDFVGAMKYRQEIKDIVDRESKIMLTKSESLVSLMNNADNEYKFNMLVWLHSMMCMADVFNGILEDFKDGVRKANGNSKFVKFDNLDRLMTECKKEIDYLMKGTSKSFQISFAVRSDELREMIENMVGDNIREGYDIFKEEAEMVNETDRSKIEEFNKKLDHD*
Ga0134457_1000016	Ga0134457_1000016141	F076653	MTIRDKYFGWKDIFFDRFVHCCNEKSDQPQGSNIPLAKINFDNKTGYVEDGTINIAELLQYLWINNKVYGCEYAPIDISSALQTLIRLTENAKHMFEDQPGVYDMIPYRGFFLRDDFLSGKDYSLDLDKIVSGMGGWYGEDEDPCYSMFVSQDQIWNLNPILKVLADEGSILAKELGYDMNSYVSDNGYTIYNPYLSWINHYYHYCPKFNEDKLKPWDRVEDRKNKFKMTDKVKRGANNWYYSGGTISCVDSFLGKKYRKNLRTFIYRGIVFFLDRIWHTPLFEKMGVKMKYNAYYCYAATSGIWYNKGFKKRLAKRFNESLRGGGDLFGANLACMVCDHKDIDWEALRLWLDKYDEPTDKGMVNSPIQFMYLYLYYYFNK*
Ga0134457_1000016	Ga0134457_1000016167	F098313	VNLINKINNFSNVREKKFDFVIYPLDLIITVGLDYKTLCDRFENMEPEHNGEWGNKEDMGKEASFVNLVKDRDDDGRFAILWNFSSDDDITIKNTCHESFHVAMSVCQFCNMSLGFKVGEDEHAAYIAGFAGGCAYDFLYSNSTE*
Ga0134457_1000016	Ga0134457_1000016183	F050794	MLYTSNYFVKVRQKQLLDHTYALSRSQAFDYMTEFNKRLSDKVGIECTMDILLPTDDDNANIIIEYNGIIKKLMREAEKLELDTDAIKAMMRDLLGELKDDIDLNILIFDVTQLLIKYNLFRLDAITEQEFKNSFVRMDSRNMEIKKLTLSDIKEVVTMIEDRYSYALYMTEEYD*
Ga0134457_1000016	Ga0134457_1000016186	F077313	MSKYVIKRKIPKYQEAGEVGSYMLGNMDGIQGLGIEPLVNTNQGLPASVNPLGIYSLDTPDQLRTKYANAFDQDDVFPASFKGSLQRIAENYQDNGITLNNITVNDVDKSKTGSGETDVFDFTTIPYYGADDIGSRFTQMGRGIGRMRSEGYGDLSTGAKTANTITTIASGISGIMGLARNVVSGIASEKGTRTNIRLAQEREARQRRQSQMQYKDGGGVYLGPNNRFDSGSLTGEYLYPLPKSMEDQANVEVEKGEYVTQPGEAPMEAMGQKHADGGTPVSLEQGTKVITDDTTIEPDFAKYIRDTYGIKATPKDTYATLMDRYKAKIGLKSAYDDQKKALEKLKKNDKIDDENTRRLNASVLSKAINDSNDTVNGLEGRFTDFANVIYKEQEDRKMKKDEDTYFAKGGEIDNIISRSMKEYGLTEEDIAEAKKELLKKVAGIRQKMEIGGTSLFGRKLTFRPIENRFNNDPNYFGYQRQGTDGSYGGINTDERLNYYKTFNPVAYDAYMGASEGTRARALQDAIYGQTSSWMGLATAENPIIANAEALRDYTTLVSFGGEDSQGNYPEDKKAAYHDRMRDNKLGLFTTSRPMIGLDVVTEEQHKALNDAGITHFSQLFSDKNKDVVNKILGEDMLKMQALRSMKGMEGLDFILDPHKVAPGPMDIGDVENPDVKLDMPELIDSNTLPKTNTNAGKSNSGNGGRNIVGGGLDFPEVFRMTPGAVTTEGLERHYAPTVDPVLRSADQYMVEANRAFQSQLDQMGNVPDSQRGALSSNLQAIMSSNIGRYINEVEQGNVAQRAWADNVNARTWADTYDKNIAQRQAYQQRILQGLAINDENWARYFDSVNDEIQQKWNTATTMNTLRSIFGDVKIGPNGQLIADPQGDILSYRRLYPAQEVTKGKKG*
Ga0134457_1000016	Ga0134457_100001622	F106193	LNKKNIVMGCNTCEEKALKAERERIERSMMNRVSSTVISDREYASRSTAGCMVMLDPLKTMERDVVSIYKQTRTIGDVGIVYLNMQKKIREWIKNLPYGCPPDEEVQEMRKEILDGRAIYIKP*
Ga0134457_1000016	Ga0134457_100001627	F089590	MKDKDMIERVGALWNIALAYGASCWAYFQPVHHLLTVLLIVLIANFLARLAQSVRGWKLRRSRRRRFSFKRWFREVRFTDILKEFALSCFIVMTLCVIYKTLYPIEEEASMILAVTKYGVYIALVGYVMLFLNTIGDAFSDAYLVKVFKAVFKRINVFKMFSFSKNIPDETFDDIRRIADDEVKDKS*
Ga0134457_1000016	Ga0134457_100001630	F042095	MAKTLYKYEASSNKFVWFTTWDRALRNYYTDDYNYVPDPVVDNPYNTFVEFRSRKPGMANVDWGDGIKEQFPMTKVQGQDNYRIIFRSLAIQHRKNPNTTWWFRKEDGSQYVPIDNHAYADGRRDVQRAVSIDFTCDIYYANIQTCKMTAFPIVDIPGLEFLVVSHTMYVNDGIPVDKLSRSNKLIYIGLSNVGQRMTEMPEAITSKTEVYYLSMFNMLDLRDIESSGIRNIKNMKNLQTLELSSCYLDRYIKEFNDLPKLTSLNITQGPSDMWNYFDINTLPFFEVDKINPNITDFIFLDDWKNGERRTGWNDDNMSGRGLDHITNFYASHSNGIRVDKLPDYIYEMRSITRFGMNYSTHSQKRSDDFVNSFYDLVVGWDQITMTSVAKDGKRNQFYGLSVSMYGSTYPDENQRPTGQEQAPEGFVKGQSNGSPATPMEKIYVLKNNYAQKWTIKPE*
Ga0134457_1000016	Ga0134457_100001637	F089591	MTMTIQEAYLRSLQKNEQNLANGGIKLDPGRFVLLFNEAQDRLVKYYLNRKDDETIRSIQNLLVYWMSLDNAGRIDDPESTSFNLPDDYLWFSNIKGVFSYKGCEATDFVMWEAKNENIHELLGDENNRPSYDYRETFYSIGNGKVVVYESGFRTEEVKMTYYRRPVRVDLSGYINAAGIQSTDIDPELPDYLVEEILDMVAKQFNLNENELYRYRMDKDNVASFK*
Ga0134457_1000016	Ga0134457_100001644	F093883	MEEDKDIKKEIRDYLKEEADTHIRHWLAIKRESKRLYSEIEDRTKKIALKSSSLIKEEDFVSLHEMTHKIQMLNIEAVKVNSRLMFIIQLATSFGMDLDFDTTYASTAKSIMEDRTSGFVFYDDKERLRYADKELEDMFHDMSVTEVSKIGVVQSYELLMKQYNEFKEIKANATGKTKADE*
Ga0134457_1000016	Ga0134457_10000165	F064725	MTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAVVKTSNKQAVLPSDFFDMLDAYRCEPLVCEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITEKIYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYAWDNYDITISGNTMYTGFDGFIYIVYRATPKDEDGLPYIPETDLGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSHERMWPNAFDKYIKLI*
Ga0134457_1000016	Ga0134457_100001650	F058555	METKIVLLQKMKSNFDKILTEAYIPKDIQARKDELGCLRLPAGSLVCPVDYKPVTNKDGKKVTAVKYSNKKDNIRGSGMVMEKKCKQVVAYLTIINVQKHVFLRNRMREGYRDRIEINTDDFIDILSDGIAYFCYRHVIENCHEDIDYQLKTLKAYAEGEIRIALSDIMIYSYKAKKNEDTKDIFVGKKTSVYKCLDKNLSSDERRNMANKSRKLDRVRILSKIIFRARTRNVHHIYKVTKRKTVKFNIAYLLNELNKKLIGIGMHEISKSTIYRYISMFLDMCKKSISDLYDEVKKHNGVANTKDRKNVTIGCLRLLYKGKYMHILISTEYIRDVFLGEKSSEMSKAG*
Ga0134457_1000016	Ga0134457_100001669	F083452	MSGRVKIKIKDNKPKIDVFKVIENRFKNMNELRDLIDLDPRKGLVRIRDGAGFREVERGGCLHRNYLNLLEEELGAKLSIDLIDKYVKRK*
Ga0134457_1000016	Ga0134457_100001673	F057001	MTSKDLNKVQNEVKKASEKTLTGAVKAWCQLFKSGKEVNEILKDNDIKVDKAIVPALVALAREKEMVIQLCKEILPRVNNTFCAYKEVEREYFDKLDQDKNIKMTVDKIESIAILGTNHKRFGYNDPTEYDGGVYYDVFNGSDKRIVKCAVPIKRYTFNLIAKCVTYYLTHPKNER*
Ga0134457_1000016	Ga0134457_100001684	F078006	MEDNILKRAAAELKEAGCRVFAWQDDTYNRGWSKGDYIMLYYAFPDSPNIGYLSHGEYGMSVAYSRAYIPSCGSGSGCCVKEEATFDLETALDVLNGPLPRWCRSYGVYPKQYDNIDKWYNSDNHNKKLFKEI*
Ga0134457_1000016	Ga0134457_100001686	F085718	MVIEFDFEIYKNGDYDKVYLRNGKEPRVLCDNGKGNNPMVVMIEDDKADDYIILRYNETGRRSINGQSGLDLMLSIKEREPELWVVVISYMDNKDKIQKMVLPNFFSKNIRGNIYLQGSSKSSVLYYVDKLEEDGCFDELCEKIRVKRDRIYNMKIISLSDDEATV*
Ga0134457_1000201	Ga0134457_10002015	F105374	LRPGFGAAENIRYLVLSKGVFAMKKRVALLVALCIWKVVAAQTPYGEMPERFRPDTLPCRLGGGVCFGMDGLDAAIPRGGGASSCRDPRVVFVAGDTLITFISVAGVANTALGDPVCRFYGRNVARVVSRMRRVTGGRMGAADNDFPDDPDFAELQGVVIENQRYPWESHAAGDSAYRLPVARSLVGGKEDPLLGSDMRRRYVRLLTEVSVELKAGGTRPFVHVVYLLPDP*
Ga0134457_1000470	Ga0134457_100047018	F068855	VPTISKCPSSSVPTVEAQEPQVRKILAPQGLQAEKERENANVQNAGWLHSFDADYHYRGSDLHYHVNVSAALSEGGAVW*
Ga0134457_1000742	Ga0134457_10007423	F076064	LKKTTPGRALENLFYLQYDLPPEASFHATTEEAKRPDELYMRKLLPELTRLKLQPRHVVANDEAYYAAMKGVTLFTPEAEKLMLTEDYFSARRQIRLCAPDLKRRNETRRHPMPVLKLY*
Ga0134457_1002475	Ga0134457_10024755	F032286	VIPVRRRALVFDVRFFAGNAADDTLVTGGTLSFCRLMRLCVKRRNVILNGKRRSLPDSALFHADNRTEQKTISPFSLALIFTFDFAALSERRSCPEDRSRRFVPVGTLALSRSWRLLRWGRYPVRTVMQFSRFRCDCKTILAKNIDLSRISKRSENAPKNADFHAYGQDRKRTEN*
Ga0134457_1003410	Ga0134457_10034103	F047126	VYLKTKKMTNISQTQAGFKSKSLGILCGFQGLLTQNPAALVETDDIFDVSDTPYGFSGLNTLRAAGVPHPLPPFAQRFIACFCSQTAAASQRKSAYILSSLESPCILCSLLRYFHILSKKLQKTC*
Ga0134457_1007406	Ga0134457_10074065	F088920	LILHLILHLILHFSQKAAIFAPKRAFSFLFVPTLFFTGLSVFSPQTSPKISGQTSLH*
Ga0134457_1015694	Ga0134457_10156942	F074899	DPHRDPHGEMSGRKQWNKQAATSSFLDKKTPQSLIQQGLEGSTVVGKDEVGSSNLPSSSK
Ga0134457_1018922	Ga0134457_10189224	F081354	FCGVSSSFISYLQSVAPFLSAKKALDLVRENQQSSAHNFVKDFSSIFPKSRRRSPLKKGAGCKNPLENGKAEVQILFEPLQAAISSMELPKNFENKKLPNTLRRLAFLPFRL*
Ga0134457_1035598	Ga0134457_10355982	F101193	MARKCTEYHYFQHTYWDVMARYNWMRCPYCGKLCKPSRFKAATVLVPIELVIFVVCIFFRNSMNDAIGWFAAWLLFVLLLFLPHYIYVRFFMPY