3300013886: laboratory microbial enrichments from Reconcavo Basin petroleum reservoir, Newcastle Upon Tyne, UK - 15 gl 40C L1 15gl 40C L1

Overview

Basic Information

• IMG/M Taxon OID: 3300013886
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0128767 | Gp0208153 | Ga0181296
• Sample Name: laboratory microbial enrichments from Reconcavo Basin petroleum reservoir, Newcastle Upon Tyne, UK - 15 gl 40C L1 15gl 40C L1
• Sequencing Status: Permanent Draft
• Sequencing Center: UNIVERSIDADE DE SAO PAULO
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 49775595
• Sequencing Scaffolds: 6
• Novel Protein Genes: 7
• Associated Families: 7

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	4
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Microbial Communities From Methanogenic Microcosms From Oil Petroleum Samples
• Type: Engineered
• Taxonomy: Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Laboratory Microcosms → Microbial Communities From Methanogenic Microcosms From Oil Petroleum Samples

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline)

Location Information

• Location: Newcastle Upon Tyne, United Kingdom
• Coordinates
  • Lat. (^o): 54.97825278
  • Long. (^o): -1.61778056
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F015738	Metagenome / Metatranscriptome	252	Y
F017851	Metagenome / Metatranscriptome	238	Y
F037272	Metagenome / Metatranscriptome	168	Y
F045118	Metagenome / Metatranscriptome	153	N
F047698	Metagenome / Metatranscriptome	149	N
F082738	Metagenome / Metatranscriptome	113	N
F085739	Metagenome / Metatranscriptome	111	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0181296_100143	All Organisms → cellular organisms → Bacteria	26708
Ga0181296_100568	All Organisms → cellular organisms → Bacteria	8261
Ga0181296_100597	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	7952
Ga0181296_101191	Not Available	4712
Ga0181296_102294	All Organisms → cellular organisms → Bacteria	2962
Ga0181296_107209	All Organisms → cellular organisms → Bacteria	1191

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0181296_100143	Ga0181296_10014347	F082738	MKTNAKGRRCAPTVTARRLEQFPGKGTAYIRDGTPNPRLTRPEDYGWTEISDAEIAKFARLGYDIWYKTASMGGAHRVYRSLKKAGK*
Ga0181296_100568	Ga0181296_10056810	F085739	MEHKMSEIPIAGETCCANCVNDATCSHRSALPGIALICDLFVNRTLPPEVQDAIRAGDRCHICGAPAILGGGGRVTCGNCLFRQNAARDRLGDKAIREWRGTAAEPPAPVLDAGADPDEVEEEEEA*
Ga0181296_100597	Ga0181296_10059710	F015738	MPDPDRPSPVMWAKVDTDLYQDLEDAIGEVFPGEPDRVRLAAVKVWGIIMSRVPASDRIEGMSWCRHFDRAIDCRLVKEDRPACIEERNGCAHCPESTYRVRRGPDR*
Ga0181296_100597	Ga0181296_1005972	F017851	MTPTLSRQFFETFPPEVARAILEGRPLRIHAAKVSVVREAGTTGFAIDTLPRDGRPKEWERTTHQICKILKREVERLPVETKRLLATFAYILPGEPILLFQVETWLSMKDDGGSWWEVPAYLSLAAISLPAVVKASEQAKKRILKVVTAI*
Ga0181296_101191	Ga0181296_1011912	F047698	MQQATAIVGVLIGFLILTQIGIFVCDAMIGASSVNESSQLYEAQEEAIATFVQCLSIVRILLIVAIVAVVFQYLQGAGLIPGFGGQRQGGY*
Ga0181296_102294	Ga0181296_1022944	F037272	MTVKQIMRIHTAAGTEDIDADRLLIENDEYILFRGDDEVRRVPISDVISEIDSETGEETGDIETVYSRS*
Ga0181296_107209	Ga0181296_1072091	F045118	SVPKNYYGSNYFSVGEAGTRAALKKVEGELVQNGVFTNLEEAELSRIDTFKNIEPEEPFSSYFSLFSLLKARRAQQRGYGTTFLVANSSQEFCVYDKLQEMREHGLETSELPETMRFEHRALKKEKVRTLYGFTRVNELFHGGYEVVKEKQVESWKNSLFSFSAEEVVVLGSKQLEQEMKAFQEKFGSNWFQYFLKSYGAYSLAKFAGKEVVRAALENLNSERTKVWRTMKLLEEAERELLVLTREEGSSKTLGELYEELRGKVCELAGRN*