3300013863: Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In5 SAF170 SPAdes reassembly

Overview

Basic Information

• IMG/M Taxon OID: 3300013863
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0095512 | Gp0111887 | Ga0181470
• Sample Name: Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In5 SAF170 SPAdes reassembly
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 38468029
• Sequencing Scaffolds: 1
• Novel Protein Genes: 1
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Clean Room Microbial Communities From Nasa Spacecraft Assembly Facility At Jet Propulsion Laboratory, Pasadena, California, Usa
• Type: Engineered
• Taxonomy: Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Clean Room → Clean Room Microbial Communities From Nasa Spacecraft Assembly Facility At Jet Propulsion Laboratory, Pasadena, California, Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Surface (non-saline)

Location Information

• Location: USA: Jet Propulsion Laboratory, Pasadena, California
• Coordinates
  • Lat. (^o): 34.1
  • Long. (^o): -118.1
  • Alt. (m): N/A
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F044253	Metagenome	154	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0181470_105465	Not Available	1294

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0181470_105465	Ga0181470_1054652	F044253	MLLEYIPTEEWDAEIFTNALLRCKFKFHRDRIKVDDDPFLVEREF*