3300013617: Coral viral communities from the Great Barrier Reef, Australia - Pocillopora damicornis (liquid nitrogen) - PDam_LN2_DNA_MDA

Overview

Basic Information

• IMG/M Taxon OID: 3300013617
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0118633 | Gp0137666 | Ga0117785
• Sample Name: Coral viral communities from the Great Barrier Reef, Australia - Pocillopora damicornis (liquid nitrogen) - PDam_LN2_DNA_MDA
• Sequencing Status: Permanent Draft
• Sequencing Center: Australian Institute of Marine Science
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 8863627
• Sequencing Scaffolds: 1
• Novel Protein Genes: 2
• Associated Families: 2

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Coral Viral Communities From The Great Barrier Reef, Australia
• Type: Host-Associated
• Taxonomy: Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified → Coral Tissue → Coral Viral Communities From The Great Barrier Reef, Australia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus

Location Information

• Location: Australia: Great Barrier Reef
• Coordinates
  • Lat. (^o): N/A
  • Long. (^o): N/A
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000713	Metagenome / Metatranscriptome	925	Y
F029759	Metagenome / Metatranscriptome	187	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0117785_100045	Not Available	2305

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0117785_100045	Ga0117785_1000451	F029759	MFINIYAFYALLACNLSVFLFALYAHARVRANEKVLLDLDWETLADLTGQVGALKRSLQKTNNRINGMTSSDPVSVLSELPVLQQAPQVQNGQFNGG*
Ga0117785_100045	Ga0117785_1000453	F000713	MPLVKKRLTIAAGATSDQVLQGTTYEYVDPGTRLVVAAADNSGTYSGDVVMNFTVNNAEFAKDTVVSEGVSGEAFGWNNTGYVMNDMVTTGQVRNRPVITFTNNDSASATIDVAVFIGG*