3300013280: Activated sludge bacterial and viral communities from EBPR bioreactors in Queensland, Australia - SBR4-V90903

Overview

Basic Information

• IMG/M Taxon OID: 3300013280
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0118585 | Gp0137257 | Ga0119915
• Sample Name: Activated sludge bacterial and viral communities from EBPR bioreactors in Queensland, Australia - SBR4-V90903
• Sequencing Status: Permanent Draft
• Sequencing Center: California Institute of Technology
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 33646596
• Sequencing Scaffolds: 5
• Novel Protein Genes: 5
• Associated Families: 5

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	2
Not Available	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Activated Sludge Bacterial And Viral Communities From Ebpr Bioreactors In Australia
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Activated Sludge → Activated Sludge Bacterial And Viral Communities From Ebpr Bioreactors In Australia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Australia: Queensland
• Coordinates
  • Lat. (^o): -27.49999
  • Long. (^o): 153.01209
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F043249	Metagenome / Metatranscriptome	156	Y
F078533	Metagenome / Metatranscriptome	116	Y
F082719	Metagenome / Metatranscriptome	113	Y
F091594	Metagenome / Metatranscriptome	107	Y
F100051	Metagenome / Metatranscriptome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0119915_101265	All Organisms → cellular organisms → Bacteria	2152
Ga0119915_101481	Not Available	1934
Ga0119915_101807	Not Available	1676
Ga0119915_103652	All Organisms → cellular organisms → Bacteria	1055
Ga0119915_103964	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1004

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0119915_101265	Ga0119915_1012652	F100051	MLERLICAVFGHRYVVERVLNHGARKVGCTRCGKHWAMHDGTRSFVPWDGEFEALYAPGGILAEASEDGTPNAKVKGAE*
Ga0119915_101481	Ga0119915_1014812	F082719	MDRPSVFYNTKMEAMMASRDEEFVTEAREANRKIWDGINALIALQRQWNALDYGNTLAVDGVVAAEVGAVVFDTATAFVAVLNAGHATNMAKLL*
Ga0119915_101807	Ga0119915_1018075	F078533	MTPAEFKRARETLCLSQNDLAEVWGMGDNGGRTIRRGERGGRPLTPTPRG
Ga0119915_103652	Ga0119915_1036522	F091594	DQERRDRGKNQMNDNGITTYCLGSGELKCDGCGQEKNWQALNQMPDALRKALQAQARRIDDTECILSGRPWYVAA*
Ga0119915_103964	Ga0119915_1039642	F043249	MPKIVGTRERVHQPFYDSLIRVDGATDLRGATVGAFGAVQARSQLFVRQGADLAVSNLTTGGFFPSDQTFITLAVRVWTYFRFNGEQQFVSGQGTFPVDSVAGLTSDRVMRVHKLYHQSQNQLFWQLVAGDKPQLTTFTAYTPFAGGLDGFFADSRLPRANNGVPTSSALMRLARPVLIPPRQGFQVVAIASPIGQSVGAPLIEEPTG