Basic Information | |
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IMG/M Taxon OID | 3300012622 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0118646 | Gp0138034 | Ga0118097 |
Sample Name | Human skin bacterial and viral communities - University of Pennsylvania - MG100370 |
Sequencing Status | Permanent Draft |
Sequencing Center | University of Pennsylvania |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 22700208 |
Sequencing Scaffolds | 1 |
Novel Protein Genes | 1 |
Associated Families | 1 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Proteus → Proteus mirabilis | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Human Skin Bacterial And Viral Communities - University Of Pennsylvania |
Type | Host-Associated |
Taxonomy | Host-Associated → Human → Skin → Unclassified → Unclassified → Human Skin → Human Skin Bacterial And Viral Communities - University Of Pennsylvania |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal surface |
Location Information | ||||||||
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Location | ||||||||
Coordinates | Lat. (o) | N/A | Long. (o) | N/A | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F105149 | Metagenome / Metatranscriptome | 100 | Y |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
Ga0118097_108147 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Proteus → Proteus mirabilis | 501 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
---|---|---|---|
Ga0118097_108147 | Ga0118097_1081471 | F105149 | YQGGSSRKQGPRLAMRDAEDEPPRDAPVRACEWPSKDFMDQAGIKEEFNAYVRNADLVSFEADKCRQYHYLTSSFVRRFEFSSSHNSQTVLFDLYENSYTMDLEDFTTACKLPSGVILMILPNLNLEISLRILLWKNLGT* |
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