Sample 3300012568

Basic Information
IMG/M Taxon OID	3300012568 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0121517 \| Gp0160634 \| Ga0157476
Sample Name	Freshwater microbial communities from Central Basin Methane Hotpot in Lake Erie, Ontario, Canada - Station 1365 - Top - Depth 1m
Sequencing Status	Permanent Draft
Sequencing Center	Molecular Research LP (MR DNA)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Freshwater microbial communities from Central Basin Methane Hotpot in Lake Erie, Ontario, Canada - Station 1365 - Top - Depth 1m

Sequencing Status

Permanent Draft

Sequencing Center

Molecular Research LP (MR DNA)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	10121172
Sequencing Scaffolds	35
Novel Protein Genes	41
Associated Families	38

Dataset Contents

Total Genome Size

10121172

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	22
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Falkowbacteria → Candidatus Falkowbacteria bacterium	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → cellular organisms → Bacteria

All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon

All Organisms → Viruses → Predicted Viral

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium

All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Falkowbacteria → Candidatus Falkowbacteria bacterium

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities From Central Basin Lake Erie, Ontario, Canada
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Microbial Communities From Central Basin Lake Erie, Ontario, Canada

Ecosystem Assignment (GOLD)

Name

Freshwater Microbial Communities From Central Basin Lake Erie, Ontario, Canada

Type

Environmental

Taxonomy

Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Microbial Communities From Central Basin Lake Erie, Ontario, Canada

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater lake biome → freshwater lake → lake water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

freshwater lake biome → freshwater lake → lake water

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Water (non-saline)

Location Information
Location	Ontario, Canada
Coordinates	Lat. (^o)	42.097417	Long. (^o)	-82.141111	Alt. (m)	N/A	Depth (m)	1
Location on Map

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Location Information

Location

Ontario, Canada

Coordinates

Lat. (^o)

42.097417

Long. (^o)

-82.141111

Alt. (m)

N/A

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000370	Metagenome / Metatranscriptome	1221	Y
F000714	Metagenome / Metatranscriptome	924	Y
F001483	Metagenome / Metatranscriptome	686	Y
F002259	Metagenome / Metatranscriptome	577	Y
F002287	Metagenome / Metatranscriptome	574	Y
F003659	Metagenome / Metatranscriptome	474	Y
F005775	Metagenome	390	N
F008615	Metagenome / Metatranscriptome	330	N
F009801	Metagenome	312	Y
F011218	Metagenome / Metatranscriptome	293	N
F014976	Metagenome / Metatranscriptome	258	Y
F016114	Metagenome / Metatranscriptome	249	Y
F019929	Metagenome / Metatranscriptome	227	Y
F025746	Metagenome / Metatranscriptome	200	Y
F026828	Metagenome	196	Y
F027829	Metagenome	193	N
F030991	Metagenome / Metatranscriptome	183	N
F031793	Metagenome / Metatranscriptome	181	Y
F033039	Metagenome / Metatranscriptome	178	Y
F038157	Metagenome / Metatranscriptome	166	Y
F039125	Metagenome / Metatranscriptome	164	Y
F039990	Metagenome	162	N
F043770	Metagenome	155	N
F044970	Metagenome	153	N
F046838	Metagenome	150	N
F048946	Metagenome / Metatranscriptome	147	N
F053291	Metagenome / Metatranscriptome	141	N
F065363	Metagenome	127	N
F066572	Metagenome	126	N
F067260	Metagenome	126	N
F078633	Metagenome / Metatranscriptome	116	N
F079522	Metagenome	115	N
F079657	Metagenome	115	N
F082370	Metagenome / Metatranscriptome	113	Y
F083690	Metagenome / Metatranscriptome	112	N
F093168	Metagenome / Metatranscriptome	106	Y
F093861	Metagenome	106	N
F100544	Metagenome	102	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0157476_100216	Not Available	2630	Open in IMG/M
Ga0157476_100279	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
Ga0157476_100960	Not Available	1695	Open in IMG/M
Ga0157476_101147	Not Available	1498	Open in IMG/M
Ga0157476_101156	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
Ga0157476_101230	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1405	Open in IMG/M
Ga0157476_101403	Not Available	1233	Open in IMG/M
Ga0157476_101550	Not Available	1148	Open in IMG/M
Ga0157476_101676	All Organisms → Viruses → Predicted Viral	1090	Open in IMG/M
Ga0157476_101706	Not Available	1080	Open in IMG/M
Ga0157476_102030	Not Available	922	Open in IMG/M
Ga0157476_102159	Not Available	861	Open in IMG/M
Ga0157476_102303	Not Available	800	Open in IMG/M
Ga0157476_102304	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	799	Open in IMG/M
Ga0157476_102307	Not Available	798	Open in IMG/M
Ga0157476_102315	Not Available	796	Open in IMG/M
Ga0157476_102387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	764	Open in IMG/M
Ga0157476_102403	Not Available	757	Open in IMG/M
Ga0157476_102591	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	704	Open in IMG/M
Ga0157476_102609	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Falkowbacteria → Candidatus Falkowbacteria bacterium	700	Open in IMG/M
Ga0157476_102704	Not Available	677	Open in IMG/M
Ga0157476_102714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
Ga0157476_102744	Not Available	668	Open in IMG/M
Ga0157476_102758	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Falkowbacteria → Candidatus Falkowbacteria bacterium	665	Open in IMG/M
Ga0157476_102915	Not Available	633	Open in IMG/M
Ga0157476_103076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	600	Open in IMG/M
Ga0157476_103092	Not Available	597	Open in IMG/M
Ga0157476_103181	Not Available	582	Open in IMG/M
Ga0157476_103198	Not Available	579	Open in IMG/M
Ga0157476_103367	Not Available	553	Open in IMG/M
Ga0157476_103469	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Falkowbacteria → Candidatus Falkowbacteria bacterium	539	Open in IMG/M
Ga0157476_103499	Not Available	535	Open in IMG/M
Ga0157476_103654	Not Available	517	Open in IMG/M
Ga0157476_103685	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	513	Open in IMG/M
Ga0157476_103773	Not Available	505	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0157476_100216	Ga0157476_1002165	F083690	MPEITADKIIGKTLFAKKDLTRLNSSLVKIGTIVKGSPVGQVYSYIQRGGNVYWQFIDFNNKPYFIIHTPDSFKFTGDVKQAVQEQKKEVEKLEKQEKGSVPFYIEKYGKWILLYGIGAYLIATYIKSRK*
Ga0157476_100279	Ga0157476_1002791	F078633	LDAQHLFGIYIPVMRHTWQPDLKREWYAALWSKHDKTMLGPKFEATAHPDDIERFAAFAAWIGDLLRNPEKFT*
Ga0157476_100279	Ga0157476_1002793	F016114	MKNYKHEDYWAAAFFDSRDVETINEMAAMARRMLICQGELQRDELLRLKMKYPHLTTKD*
Ga0157476_100279	Ga0157476_1002794	F005775	MAKQRPIYTKAQHQIVTPAFVEKKIQLHKSIKWTTKDDRDLFIMVSGSVTRYVPKSEHNSQAPMGFFNLQMGHYNKISIHTRDFAQLVDVFEQLTLFLKNNAGKLDQVVTKELDTYTTHHLKNLLNTNEK*
Ga0157476_100960	Ga0157476_1009601	F093861	MKNEVMVSPLHGEENSLKSEKKVVQPLPGAEDTALQYLFSHHLFTVKNGEYEASLKYLFINANVYLKNTLNKRFLSVVNGHEAVITLNVSKWLTWYKCTYVEGKSGEIIEIIKESESLKKARSRAIICLNTFDEFYGEAYRQRLVSCLFITLTNVPGARHSIRSFIIQYKKALHRSGVKLLGYVWVSEVSFKSEIPGGHWHYHLVISVERLHVRGQKLPEVLTQKYIGTPLGGGLWGQKTECTFVYSAAIKYGHCKGKQANAVNLYLNKYMGKHSGAVLGVRRFGASKNITSFISARRRRKQGN*
Ga0157476_101147	Ga0157476_1011471	F003659	MTAADVLGRYLIAKKDVPVYDAPFGTRIGTIKKGNSTPEVYSYLVRQGQVFWVFDYTIPGQTPGAYYALQSPDAFSLSSVPGNVAIAPNVLPSVDVFPAGSIKKYAIFGALGLLALFILKK*
Ga0157476_101156	Ga0157476_1011561	F065363	QALSTVFRGQVTTAARQRITELYNGNNFNVQNLNRMTARQISDQITAIDSQINMTPRTQFGRQMALARFRLVYQQRFDQVSGGGGFLTALPGWVLPAALGLGAVLILRGRK*
Ga0157476_101230	Ga0157476_1012301	F000714	VSVEHATIAPTNQTKEEKMETTETTVPDTYNPNLLVTYKVIRGYSDAEYATDKVVNIEWDLHNGRTNSKLVQTLNSKINSVKDIITEAYADSDDQETLRSIAEALGIELTRDVEWSATIEVSGTIQLDLLADSDTDVEQEIYDNLYVESQNGNIEVGDVEVTNVREN*
Ga0157476_101230	Ga0157476_1012305	F039125	MGDRANFGFRDSRENVVFLYGHWAGHNMLANLANAVQAAEPRWQDESYATRIAIS
Ga0157476_101403	Ga0157476_1014031	F066572	MTTITWMDNRKLMDELWPKWRLEPVLSSILNEKWGQLHQDKLQSCIRQHRLVRDSKPDISAIHKAYCALIPQNLVGDREVEQTRNDLQRCTPISLEEFAEWDVWAEAMLKNVTNEELKQVHEFIGHVPESRRILAVAVEHVRRGN*
Ga0157476_101550	Ga0157476_1015501	F048946	MANRIKISTTDVLLIGGGLLAFTAVKRILIAAGIAAGQGTQAASQLITDPNSYFKPSYYKRTGGSLIRRADAERYARQIHSAFGIFQDDFNAIVAVFSRMPSKAAISFLADVFSQIYKEDLLTFLTNGGGI
Ga0157476_101676	Ga0157476_1016763	F011218	YYTNPAKRRKIDFILEECATLMANCESDYNSRQQAKYKEQELLGEIAKIDLHFAIQCGYLIPDN*
Ga0157476_101706	Ga0157476_1017063	F067260	MTHFDKIVDPDLKRCETPEQMLQVLMYHYDLDCKLGTITSLAFRQGLKTAVNMIAAKAKSQNSALQN*
Ga0157476_102030	Ga0157476_1020302	F008615	MNTPNTFGAKMFTRFMRKGWHISFTDSYQDRVCVIPPERLDAKHLFGIYIPVMRHTWQPDLKREWWAALQDKNTMHGPTFEASAHPDDIERFAAFASWIGDLLRNPEKFT*
Ga0157476_102159	Ga0157476_1021591	F009801	MNECKKEYCDFIGSKAFEDDGGWSYEVWTAAQQAVFKRIAARFRSYGDIDYTGKEIANYVEFLAKQDVSE*
Ga0157476_102303	Ga0157476_1023033	F030991	MVLKYLGCDKKYFRYELYDGDRMELYVETKLNARATAKLLFCNFGIKHIVLKIYNRTYGIKT*
Ga0157476_102304	Ga0157476_1023041	F001483	FTVVFLCVLGFGGWIVYSEKDAFMASYRAQQAMPKMNGRYEEAYTFLLKHTEVELVSIMEVNTLSNTRKIAFVSTRNSGRIKQYDGLDVGLFSKNYDNNNDVISLMSGKIPCSPYLKPQSLIGFVYKDNGVNFMCRISVPAEPGVFIGQISVGWKEQPTDLEAAQTALIISSALLFKK*
Ga0157476_102307	Ga0157476_1023072	F044970	FNDYSTMLIAIEQKTKALESKCLSRNYGGFTGDITSIQHELTMLTMWITQAQCEQIRENTYRILNKV*
Ga0157476_102315	Ga0157476_1023151	F079522	LHDLPLFAFVDKRANGAAMNQNVVYGKDREAIVPYDVAIWWHLAFDVDKSIFNPTYIPRDLMEEIQQLQRRSIIKALPDSDPGRKWLILRFFPDGI*
Ga0157476_102315	Ga0157476_1023152	F027829	MAFTNRFEADISPKKTRIDPKAMQQTIDIPIGSNPDTGKQYSFRVYIAVSKMQKKLNYAPTILITITFFKYKLHLQSRDVKALVSAFKKLSNFIDTASPNLENKLSQELLTYDQWEKEYFERKNMGIIDINREEYKK*
Ga0157476_102387	Ga0157476_1023872	F100544	ATPQTVINPKQLRVTLTINNDVVIDDDVALHYASPATGGFSGGFPFFIPIPRRLTGQDTIQIRFTNAAASQNVDVTIWYRNEL*
Ga0157476_102403	Ga0157476_1024032	F014976	MKNFNKISKEKWIQLKRNADMYEVVGYQFGKNVTYDEVKVWNRDKWGNIRYSYVAVNQYWY*
Ga0157476_102403	Ga0157476_1024033	F033039	MSPHQKAAHEIIHEYYFMLPNNGSLNSGINSCESRYKEAVDCALLSVKQLILTLEFMSMEPNSAFIMDRINFYDEVQTELYKIKDGDSKLSWDNLMEVFKK*
Ga0157476_102591	Ga0157476_1025911	F002259	MQGTTRMVYDSITTAATNFTFFKGAAQRAFPLTNVGANGNQFQVNEALLVEKIGFFIPSAADGIAYTGLTGLSVKFDLVIGNKTVLKDVACEFGGEQAFYNDGTIGSSVIDLEGVGILIPPQVEYYVVAKTYSATTRVAEASRLGCYLFGTGALLNFNTTI*
Ga0157476_102609	Ga0157476_1026091	F002287	MSQINKLAYVDQKLGAPSDGQQTTRILFNTIEAPGTTSGLIFFKTFQGLTNGQTNLTQNRLDSMESMVIKTIWLAQYNTAGILENFGGKVQQTVSIILGNQQVVKSLPIQFNQGDTAQTFDRLHENAAVITDTFVVPFDSSYQFHMPVEIRLLTDIVI
Ga0157476_102620	Ga0157476_1026202	F093168	MKAIVKSYLAEVNLGSTAPGNGQNINIQDYPQLRDVYITGVEVFDVNQVSTSPSGRTVVGALSGITLTLMDKYNMEMVYQYPTFDLNPANVGGFYRDFQPFNLQLTKSYITILNNFGLNAGESVVLNFFYVQMKDWN
Ga0157476_102704	Ga0157476_1027041	F026828	MITEELIGNAIAFLAGWILKRPDFVQKIVSKLFAKKDK*
Ga0157476_102714	Ga0157476_1027142	F000370	MSYKSDVKPVYIAAANAVAFAGRTRLRGYVVQSTGSSGTLVINGLANATTVSSSTNTQVFFTVSVGAGQTETLNIPEDGVLYAQNNGTGIVDGIG
Ga0157476_102744	Ga0157476_1027442	F039990	VRQAESAVALIPDVTGNSIDAIRQRILATAESMGAFAKEWKLAEKEIAEPVLGHLKTRLENGDEVPGWKLTSMSGRKFVECGAIAKAAQGITKETLILAMGGKMSEKSYTEFCANNGVEPDQDAIQTGAHSLQLRQTKVK*
Ga0157476_102758	Ga0157476_1027582	F031793	LTNGQTNLTQNKLDSMESMVIKTISLMQFNTAGALFPFGGSVQQTLSIIVGNQTVVKNLPFHFQYVTGQAFDRLHDNGGVSSDGISGPTVLLQTWMPAEIRLLTDIVIPPQVAFEVRIDSNAGVYGTGAVVCALSGYGKIFSAGNTF*
Ga0157476_102915	Ga0157476_1029152	F038157	MSLNVTALADFNNQIAGELVLKMVYGGSTIEYVTVQEGVKFQEPINLFEVSLYMNNSACV
Ga0157476_103076	Ga0157476_1030761	F043770	MDLQKRIDQLREQGFNNFALQDRPGPKPTKANCGRFYPLNKEKRGWANNGDEVSRDLVNYVNKFPGLYTLHYSRALLTSGTESFEIDTRPADEQTPQTFN
Ga0157476_103092	Ga0157476_1030922	F030991	VLEYKGCDKKFFRYELYNGPRMELYIETKLSARATAKLLFRNFGIEHIVLKIYNRTYGVKT*
Ga0157476_103181	Ga0157476_1031811	F046838	MFKQGNTFGKGRKLGSKNKLANRELTIQLLDKIIEDLQENYHLLTIDDKLRLLSTFRQLYNYDVINDGSDIQ
Ga0157476_103198	Ga0157476_1031981	F046838	MFKQGNTYGKGRQLGSKNKLANRNKTIELLDKIIEDLQENYELLSIDDKLRLLSTFRQLYNFDVISDGSDIQEIRVNIIQPPSYDTKELI*
Ga0157476_103367	Ga0157476_1033672	F079657	MLKTLWPKYLLFKNKIEAINIEQIDFENISYAKAEFTTPPVLEKKENHRFVCRDGNCRLTIASKENYTHALCYVLEDKDEVLFFKRLNDLVYENEKENIPMN
Ga0157476_103469	Ga0157476_1034691	F082370	MALSAQDKILYVANKLGLSTLNQMQGSTGAVYDVDTDISGQIFTSASRHQNPSVTNLTQNEFEVNEALLVENIAFYVLDGTGTGQTKNFQSIYGSNAVIVFDLVIGNKRVMKDTPVFAAGSPYTFANTANVNTTSGETSLQALLPRHQVFMEGAGI
Ga0157476_103499	Ga0157476_1034992	F053291	MITAQEIIDYIYDDNLAHFDDRDTSDDCDCHIHITLNTMVKYMEAIEC*
Ga0157476_103654	Ga0157476_1036542	F016114	MKNCTHEDYWAAAFFDSRDVETINDMAAMARRMLISQGELQRNELLRLKMKYPHLTTK
Ga0157476_103685	Ga0157476_1036852	F019929	MISYQSLINKIINFYDNHLQVKKVGSDFREQLENFATKDEKYPLVYICPVDAAPSEMGFTTEINLEIYCFDIIQKDRANINVILSDCHLILNDLY
Ga0157476_103773	Ga0157476_1037731	F025746	HEELPYILEEHMAKQEKKTLREGKVMSYTSADVMPGNPDVRASLRSKMGEAFGFQQASPKLEVIDAVDDVTGEKVNPFAAFIADAAASMTPQEKAGLKNLG*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300012568: Freshwater microbial communities from Central Basin Methane Hotpot in Lake Erie, Ontario, Canada - Station 1365 - Top - Depth 1m

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences