3300011965: Anaerobic sludge microbial communities from wastewater treatment plant in Hong Kong, China - Thermophilic cellulolytic sludge

Overview

Basic Information

• IMG/M Taxon OID: 3300011965
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0118581 | Gp0137217 | Ga0119875
• Sample Name: Anaerobic sludge microbial communities from wastewater treatment plant in Hong Kong, China - Thermophilic cellulolytic sludge
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Hong Kong
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 61968992
• Sequencing Scaffolds: 5
• Novel Protein Genes: 7
• Associated Families: 6

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1
All Organisms → cellular organisms → Bacteria	3

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Anaerobic Sludge Microbial Communities From Wastewater Treatment Plant In Hong Kong, China
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Thermophilic Cellulolytic Sludge → Anaerobic Sludge Microbial Communities From Wastewater Treatment Plant In Hong Kong, China

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Hong Kong
• Coordinates
  • Lat. (^o): 22.3
  • Long. (^o): 114.1
  • Alt. (m): N/A
  • Depth (m): .05

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001564	Metagenome / Metatranscriptome	670	Y
F046219	Metagenome	151	Y
F065696	Metagenome / Metatranscriptome	127	Y
F084273	Metagenome / Metatranscriptome	112	N
F090436	Metagenome / Metatranscriptome	108	N
F101220	Metagenome / Metatranscriptome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0119875_100141	Not Available	32780
Ga0119875_102312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3371
Ga0119875_104311	All Organisms → cellular organisms → Bacteria	1960
Ga0119875_110243	All Organisms → cellular organisms → Bacteria	940
Ga0119875_112801	All Organisms → cellular organisms → Bacteria	778

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0119875_100141	Ga0119875_10014114	F065696	MKKVIYILLILFLISCSKQQPIKYLGDREPSPLHYIDDLDIKLYAICSKHQALHLYQDVKGTIIQEIGINNYYSTMQHRMSIISYTNDIGTCQFQSATYDWLSDKYGINTNKIDPEYSQIEVMVLAFLDNRQELWVGFKKFNSFKNNIHIYKI*
Ga0119875_100141	Ga0119875_10014115	F090436	MKTQKNTPEVKSKVTFENFFLNTFANFEKISSDERKMLKNTNPNFISKSGSIYWYLTGYVYRYSSHFSRDTKTCAWFLEGKSVTNNVSGNYGKCKLEDFVQINTNAEIGKKYKIIYAPRDRRGVAFITEGEGVLQKTTEFYYIFDTFKVHKWTLVTLIEK*
Ga0119875_100141	Ga0119875_10014116	F101220	MKTKKLKNFIKKNYSKELVLNAYEFYADPPSYFLEYLQSQEQDYDYILDVFLEECRNNNVSISDAINYYIKNKKEEYECR*
Ga0119875_102312	Ga0119875_1023123	F001564	LRREQLCDPGLCPDAPEDGGRCDHCPLDRLDAAQSSEAGLLLRRALDLRAALKLGVRIGLDEIRADEFRALVVLEEEQDKLDRERLDAR*
Ga0119875_104311	Ga0119875_1043112	F001564	LIHWALRRDELCDPGLCPDAPDDGGRCGHCPLDKLDAAQSSEAGLLFRRALDFRAALKLGIRISLDDIRADEFRALVVLEEERDALDREQMNAHGR*
Ga0119875_110243	Ga0119875_1102431	F084273	LLVVAALLLAAGGVDATAVDKDILACGHNVGRLTLSDPVAYSTTTQGGVTVSGQFAGNYPPLRNGVEIRWVQLISTSHPLNTNAGANTPYFDPGELDMTGDNDPFYWNTTLKAKDGNDYPQYYYVNYQINAGKGIKFFDEPKRNKAAAPVSWLAELNLVCWETGTKNFSVLWTGTYGFNIAQNG
Ga0119875_112801	Ga0119875_1128012	F046219	LLRRAIDLRAALKMGIRISLDEIRADEFRALVVLEEERDALDREQMN