3300011299: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_D5L_HD (Metagenome Metatranscriptome) (version 2)

Overview

Basic Information

• IMG/M Taxon OID: 3300011299
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123883 | Ga0138294
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_D5L_HD (Metagenome Metatranscriptome) (version 2)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 53483942
• Sequencing Scaffolds: 7
• Novel Protein Genes: 7
• Associated Families: 7

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1
Not Available	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Austria: Klosterneuburg
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000344	Metagenome / Metatranscriptome	1257	Y
F017318	Metagenome / Metatranscriptome	241	Y
F021769	Metagenome / Metatranscriptome	217	Y
F059886	Metagenome / Metatranscriptome	133	Y
F075814	Metagenome / Metatranscriptome	118	Y
F104545	Metagenome / Metatranscriptome	100	N
F105419	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0138294_1021024	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1068
Ga0138294_1021679	Not Available	514
Ga0138294_1021829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	831
Ga0138294_1042150	Not Available	534
Ga0138294_1043760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	630
Ga0138294_1063386	Not Available	988
Ga0138294_1076218	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	880

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0138294_1021024	Ga0138294_10210242	F105419	MRKLFALGALMVAAAVSNGCISNTMYGCEITETLAPGASEGEVVMKHGAPDNIVYLGNQYCNPQTGERGEVDKYLYEYRIGGGTTLLGWLFASDEFHNIAYLIEGGRVMGGGYVGEGKGSIILGNNFGVVSTPLGVFDMNFGGFVHPKARAGYGGDGTPE
Ga0138294_1021679	Ga0138294_10216791	F075814	NESVNRPTKCFDTREVGVVQLGTGKYDVTVSVMPHSSFNQTTRLTLKSVDPASVPAVTGGTLVENVVFSLDAQSSCDGAAVAPLPNLVNLGVIYNTAPALDKSKLQLVFWNGSAWTNIDTTPDPVPGNPYVSSTISQPGTYALIVKP*
Ga0138294_1021829	Ga0138294_10218291	F000344	MRPKHPHAAESGVGKHTARESERAQACATGKERVANAHSHKLAP
Ga0138294_1042150	Ga0138294_10421501	F059886	VIYASRTAFADLRGERHQLSPTIPRSPGIIPAVLSVAPFRPLRFDC
Ga0138294_1043760	Ga0138294_10437601	F104545	MTAKGVRVGKDQPIRTCTAQHAQQRIVGQQAGIDCDAATRAVRVPTASGQPDVEPVDTILRSGGRRKTFRDAPASRGRVRQRLEMAPVANPFRHAVIKVAAQ
Ga0138294_1063386	Ga0138294_10633861	F017318	MGIPLLAAPLKFERTVEGLFDISCDGINPSVGLFNFSLSDLPNNSDFTNLFDMYRIDKIEVAWYPEYTVLSDSGLVSNAVDVQVNTAIAQISNTPTVVSDVLQYISCVGTGITQIHKRSFQPSYLMDGICPCSCFLSCNNATANWYGVAYGVAPTGTAMLFKSRAKFFMSFVQSR*
Ga0138294_1076218	Ga0138294_10762181	F021769	KNLKLELFNFKQSLDFDRSDIAYIVEGHMNACNDLSEKTIIFSLNEKLKSFTYDDDVNTLLEGLNDDMSKYQLLYELKNLYSVLNSKNQGELYRQPINVLLQTINLDTDEDRMSKVLNELAIYDWVPEIKLFVYNLTKSPEQRSNLLSGGKSEVVYTIVEQVEDGHLAYIKDSWFLLTDDSIEKTLLENHVKDDNRMKTLRSLQTAMQFATINESRIDFRISEYLTIGLSVNDSTIFINEDELSEDTSLENLFSSPIVPIVNRNFYPLLVEVSNNIDSFVELDVVKRVSNLIS