Sample 3300010411

Overview

Basic Information
IMG/M Taxon OID	3300010411 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111382 \| Gp0155437 \| Ga0136993
Sample Name	Aquatic microbial communities from North Sea petroleum storage tank - Cell3b
Sequencing Status	Permanent Draft
Sequencing Center	Shell Corporation
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	564930946
Sequencing Scaffolds	23
Novel Protein Genes	23
Associated Families	14

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2
Not Available	15
All Organisms → cellular organisms → Bacteria → Caldiserica/Cryosericota group → Caldiserica → Caldisericia → Caldisericales → Caldisericaceae → Caldisericum → Caldisericum exile	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus → Syntrophorhabdus sp. PtaB.Bin047	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Subsurface Hydrocarbon Microbial Communities From Various Worldwide Shell Locations
Type	Environmental
Taxonomy	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Aquatic → Subsurface Hydrocarbon Microbial Communities From Various Worldwide Shell Locations

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → oil tank → oil
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	North Sea
Coordinates	Lat. (^o)	60.9	Long. (^o)	1.8	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000388	Metagenome / Metatranscriptome	1201	Y
F026738	Metagenome / Metatranscriptome	197	Y
F033769	Metagenome / Metatranscriptome	176	N
F037711	Metagenome / Metatranscriptome	167	Y
F039402	Metagenome / Metatranscriptome	164	Y
F044014	Metagenome	155	Y
F051532	Metagenome / Metatranscriptome	144	Y
F056958	Metagenome / Metatranscriptome	137	Y
F079636	Metagenome	115	Y
F086646	Metagenome / Metatranscriptome	110	Y
F088355	Metagenome / Metatranscriptome	109	Y
F092080	Metagenome	107	Y
F099327	Metagenome	103	Y
F105430	Metagenome / Metatranscriptome	100	N

Family

Category

Number of Sequences

3D Structure?

F000388

Metagenome / Metatranscriptome

1201

F026738

Metagenome / Metatranscriptome

197

F033769

Metagenome / Metatranscriptome

176

F037711

Metagenome / Metatranscriptome

167

F039402

Metagenome / Metatranscriptome

164

F044014

Metagenome

155

F051532

Metagenome / Metatranscriptome

144

F056958

Metagenome / Metatranscriptome

137

F079636

Metagenome

115

F086646

Metagenome / Metatranscriptome

110

F088355

Metagenome / Metatranscriptome

109

F092080

Metagenome

107

F099327

Metagenome

103

F105430

Metagenome / Metatranscriptome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0136993_10000105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	37239	Open in IMG/M
Ga0136993_10001825	Not Available	7780	Open in IMG/M
Ga0136993_10002394	All Organisms → cellular organisms → Bacteria → Caldiserica/Cryosericota group → Caldiserica → Caldisericia → Caldisericales → Caldisericaceae → Caldisericum → Caldisericum exile	6444	Open in IMG/M
Ga0136993_10010608	Not Available	2341	Open in IMG/M
Ga0136993_10012026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus → Syntrophorhabdus sp. PtaB.Bin047	2171	Open in IMG/M
Ga0136993_10012501	Not Available	2123	Open in IMG/M
Ga0136993_10016539	All Organisms → Viruses → Predicted Viral	1797	Open in IMG/M
Ga0136993_10019861	Not Available	1610	Open in IMG/M
Ga0136993_10024182	Not Available	1429	Open in IMG/M
Ga0136993_10025751	Not Available	1375	Open in IMG/M
Ga0136993_10026241	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
Ga0136993_10030799	Not Available	1231	Open in IMG/M
Ga0136993_10057280	Not Available	828	Open in IMG/M
Ga0136993_10057355	Not Available	827	Open in IMG/M
Ga0136993_10071181	Not Available	719	Open in IMG/M
Ga0136993_10074082	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	701	Open in IMG/M
Ga0136993_10075861	Not Available	690	Open in IMG/M
Ga0136993_10076502	Not Available	686	Open in IMG/M
Ga0136993_10081622	Not Available	657	Open in IMG/M
Ga0136993_10089359	Not Available	618	Open in IMG/M
Ga0136993_10111765	Not Available	525	Open in IMG/M
Ga0136993_10113796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	518	Open in IMG/M
Ga0136993_10117859	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	504	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0136993_10000105

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae

37239

Open in IMG/M

Ga0136993_10001825

Not Available

7780

Open in IMG/M

Ga0136993_10002394

All Organisms → cellular organisms → Bacteria → Caldiserica/Cryosericota group → Caldiserica → Caldisericia → Caldisericales → Caldisericaceae → Caldisericum → Caldisericum exile

6444

Open in IMG/M

Ga0136993_10010608

Not Available

2341

Open in IMG/M

Ga0136993_10012026

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus → Syntrophorhabdus sp. PtaB.Bin047

2171

Open in IMG/M

Ga0136993_10012501

Not Available

2123

Open in IMG/M

Ga0136993_10016539

All Organisms → Viruses → Predicted Viral

1797

Open in IMG/M

Ga0136993_10019861

Not Available

1610

Open in IMG/M

Ga0136993_10024182

Not Available

1429

Open in IMG/M

Ga0136993_10025751

Not Available

1375

Open in IMG/M

Ga0136993_10026241

All Organisms → cellular organisms → Bacteria

1359

Open in IMG/M

Ga0136993_10030799

Not Available

1231

Open in IMG/M

Ga0136993_10057280

Not Available

828

Open in IMG/M

Ga0136993_10057355

Not Available

827

Open in IMG/M

Ga0136993_10071181

Not Available

719

Open in IMG/M

Ga0136993_10074082

All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon

701

Open in IMG/M

Ga0136993_10075861

Not Available

690

Open in IMG/M

Ga0136993_10076502

Not Available

686

Open in IMG/M

Ga0136993_10081622

Not Available

657

Open in IMG/M

Ga0136993_10089359

Not Available

618

Open in IMG/M

Ga0136993_10111765

Not Available

525

Open in IMG/M

Ga0136993_10113796

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae

518

Open in IMG/M

Ga0136993_10117859

All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales

504

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0136993_10000105	Ga0136993_1000010537	F037711	QAGAAAPACKRTTLSQQIDAKKRTGFGAGRGQDEGRLKFLTLKNLGVID*
Ga0136993_10001825	Ga0136993_100018259	F086646	MEFIFRIQNHYFEKGTSWTELDKIKQRSWFLSVDIEDDEVVPCYDTEHELRISLGIDFKSVKILTGKTQETQPYWEALLDMSYLNSTELREVFEDLPGESGIYMLEVWFDYGGEELNFGDDFKKLCGYRHKWDDGWICSKCGVRRADWVEADIKGRNDHDNGAK*
Ga0136993_10002394	Ga0136993_100023941	F037711	MQAGAAAPACKRTTLSQQIDAKKQKRFGAGRGQGEGRLKLLTLKNLGAIE*
Ga0136993_10010608	Ga0136993_100106081	F099327	IQGTSGEEISVLVDGIKLMALQNLSWKASQSKSLIRGAGYRKAHGIGRGPKEYELDFEVKELNQAVIAEGVNSPRSSEEKIKTFSVGGQEFEDLLDLRNATILIMYPPKNNAQRVIRFTGFEFTDVEGGFAFDDESVGRKLSGIAMDAEGLV*
Ga0136993_10012026	Ga0136993_100120265	F026738	MADRATTLSGCFQKVTLGATSKILGAGTYTISGMTRRTVETSEFGVDVDIFDFVSADGGTISLGDCMYDPTNPEQNTLRDCVENKVKLINSVTSGIRFWINSTSYLTIGTSGDILMTKAGDVKADRNGLAKTSFEGHVSGAFMYIV*
Ga0136993_10012501	Ga0136993_100125013	F044014	MSDDYKPRFSFEISFDQKERADRLITNYGLRKAIFSHILDDVLDLIEDHGGMVVGILMSDKCKPRDILPTMKEAETAAEKVRE*
Ga0136993_10016539	Ga0136993_100165393	F026738	MADRATTLSGRFQKVTLGGSDSKVLGAGTYTISGATRRTADASEFGVDVDIFEFGSADGGTITLSDVSFDPTDPAQNTLRTNVENAIKLINSSTSGIRFWINSTSFYTIGTSGHILLTKGGAVRADRNGLAKTDYEGQISGAFMYLAESIV*
Ga0136993_10019861	Ga0136993_100198612	F039402	MLTDYSSIEKEIADAPEPKILPKGSEVKARIIAVREGVSDKNDAQWYQPVFDIPSEPLALEFNDFFWDLNDRNKLDEKSAARAVRKFKLFAEAFGIDYAKPFDWVDDLPGKEGWMILGVRKSEEFGDSNTVGKYIAGK*
Ga0136993_10024182	Ga0136993_100241824	F000388	MKVIKVTKEYFQTEDEKVYFFEPLEKEISVDDMQKIVDANEKLVKELKDND*
Ga0136993_10025751	Ga0136993_100257513	F086646	MVFIFSIKNHYFEKGTPWVELEKIKQRCWFISVDIEDDETVPCYDTEHELRISKGIAFKSVQILTIKTQETHPYWEAFLDMSYLYSTELRDVTFKDLPSESGIYRLNIWFDHDGEGLNFGDDFKKLCEYRHKWDDGWVCSKCGVRKADWVVADRRHT*
Ga0136993_10026241	Ga0136993_100262416	F051532	DIMKILTCYSARFYGRRGGRKKKNVAENEPVESNGI*
Ga0136993_10030799	Ga0136993_100307992	F033769	MGIKTATLAASTVGIAANREYLRLTNESLVTRCRAGDSGITAEAGVIIEPGQTVEFRSLPSENKEIYVLSEGAAVELAYYEVILA*
Ga0136993_10057280	Ga0136993_100572801	F039402	YSDLEKEIQDAPEPKTLPRGSEVKARIINVREGVSDKNDCQWYQPVFDVPADPLVNEFNDFFWDLADRDKLDPKQAARSMTKFKNFAAAMGLDYSRPFDWTEDLIGLEGWVILGVKKSDEYGDQNTISKYVARK*
Ga0136993_10057355	Ga0136993_100573552	F000388	MKVIKVTKEYFETEDEKVYFFEPLEKEISVEDMQKIVDVNEKLVKELKDADR*
Ga0136993_10071181	Ga0136993_100711811	F000388	MKVIKVTKEYFQTEDEKIYFFEPLEKEISVEDMQKIVDANEKLVKELKDETNTISK*
Ga0136993_10074082	Ga0136993_100740822	F051532	KEKKYEEELAEDIMKILTCYSARFYGRRGGRKKKNTAENEPDESNGI*
Ga0136993_10075861	Ga0136993_100758612	F033769	MSTVNCGIKTATNTPTTVGVATGRKYLRLTNESLDMRCRAGDASISNEAGIIIEPGQTVEFRPLPSDNTDIYVMSEGKAVTLAFYEVIA*
Ga0136993_10076502	Ga0136993_100765023	F044014	MNDEYKPRFSFEITDEQKERADRLITTYGLRKAMFGQVLDDILDLIDEYGGVVIGIIASSKLKPREIIPSLKKAEEVGKHGNNR*
Ga0136993_10081622	Ga0136993_100816222	F092080	MQDKRITIRIPFEIWKGLRELQTMGKISSIQQAAVTGMDNLIQSLQADLGQNQREAATKRVLNILVEEKPFGSWEDVHRKRTDTDACRS*
Ga0136993_10089359	Ga0136993_100893592	F056958	MIMAEEVNIMTDAKPTHLTLADGKEYKLPPIDMTTLASIETTMGFGLGRLQYKLENETMTTMRSLIYALLKEEQPELDINTVGHLITLKEMTAVSTTISEIMALT*
Ga0136993_10111765	Ga0136993_101117652	F079636	YNINGNSSAYGKFIADASEEYNAYTIENANVTSADGTISTLGETQILAFDLVTDNSLVMPIRKEFEAVEDPTLLRRQKAGFFGWQECGFACLDSRMVGMGIIDRSL*
Ga0136993_10113796	Ga0136993_101137962	F088355	MKNKLSIFAGEKGQLILAILTIALFVLAAGAPNALGSVGR*
Ga0136993_10117859	Ga0136993_101178591	F105430	MTSAASQQFFDTFPPDIARGILEGRPLRIHAVRVSLVREAGSTGFAIDTL

Scaffold ID

Protein ID

Family

Sequence

Ga0136993_10000105

Ga0136993_1000010537

F037711

QAGAAAPACKRTTLSQQIDAKKRTGFGAGRGQDEGRLKFLTLKNLGVID*

Ga0136993_10001825

Ga0136993_100018259

F086646

MEFIFRIQNHYFEKGTSWTELDKIKQRSWFLSVDIEDDEVVPCYDTEHELRISLGIDFKSVKILTGKTQETQPYWEALLDMSYLNSTELREVFEDLPGESGIYMLEVWFDYGGEELNFGDDFKKLCGYRHKWDDGWICSKCGVRRADWVEADIKGRNDHDNGAK*

Ga0136993_10002394

Ga0136993_100023941

F037711

MQAGAAAPACKRTTLSQQIDAKKQKRFGAGRGQGEGRLKLLTLKNLGAIE*

Ga0136993_10010608

Ga0136993_100106081

F099327

IQGTSGEEISVLVDGIKLMALQNLSWKASQSKSLIRGAGYRKAHGIGRGPKEYELDFEVKELNQAVIAEGVNSPRSSEEKIKTFSVGGQEFEDLLDLRNATILIMYPPKNNAQRVIRFTGFEFTDVEGGFAFDDESVGRKLSGIAMDAEGLV*

Ga0136993_10012026

Ga0136993_100120265

F026738

MADRATTLSGCFQKVTLGATSKILGAGTYTISGMTRRTVETSEFGVDVDIFDFVSADGGTISLGDCMYDPTNPEQNTLRDCVENKVKLINSVTSGIRFWINSTSYLTIGTSGDILMTKAGDVKADRNGLAKTSFEGHVSGAFMYIV*

Ga0136993_10012501

Ga0136993_100125013

F044014

MSDDYKPRFSFEISFDQKERADRLITNYGLRKAIFSHILDDVLDLIEDHGGMVVGILMSDKCKPRDILPTMKEAETAAEKVRE*

Ga0136993_10016539

Ga0136993_100165393

F026738

MADRATTLSGRFQKVTLGGSDSKVLGAGTYTISGATRRTADASEFGVDVDIFEFGSADGGTITLSDVSFDPTDPAQNTLRTNVENAIKLINSSTSGIRFWINSTSFYTIGTSGHILLTKGGAVRADRNGLAKTDYEGQISGAFMYLAESIV*

Ga0136993_10019861

Ga0136993_100198612

F039402

MLTDYSSIEKEIADAPEPKILPKGSEVKARIIAVREGVSDKNDAQWYQPVFDIPSEPLALEFNDFFWDLNDRNKLDEKSAARAVRKFKLFAEAFGIDYAKPFDWVDDLPGKEGWMILGVRKSEEFGDSNTVGKYIAGK*

Ga0136993_10024182

Ga0136993_100241824

F000388

MKVIKVTKEYFQTEDEKVYFFEPLEKEISVDDMQKIVDANEKLVKELKDND*

Ga0136993_10025751

Ga0136993_100257513

F086646

MVFIFSIKNHYFEKGTPWVELEKIKQRCWFISVDIEDDETVPCYDTEHELRISKGIAFKSVQILTIKTQETHPYWEAFLDMSYLYSTELRDVTFKDLPSESGIYRLNIWFDHDGEGLNFGDDFKKLCEYRHKWDDGWVCSKCGVRKADWVVADRRHT*

Ga0136993_10026241

Ga0136993_100262416

F051532

DIMKILTCYSARFYGRRGGRKKKNVAENEPVESNGI*

Ga0136993_10030799

Ga0136993_100307992

F033769

MGIKTATLAASTVGIAANREYLRLTNESLVTRCRAGDSGITAEAGVIIEPGQTVEFRSLPSENKEIYVLSEGAAVELAYYEVILA*

Ga0136993_10057280

Ga0136993_100572801

F039402

YSDLEKEIQDAPEPKTLPRGSEVKARIINVREGVSDKNDCQWYQPVFDVPADPLVNEFNDFFWDLADRDKLDPKQAARSMTKFKNFAAAMGLDYSRPFDWTEDLIGLEGWVILGVKKSDEYGDQNTISKYVARK*

Ga0136993_10057355

Ga0136993_100573552

F000388

MKVIKVTKEYFETEDEKVYFFEPLEKEISVEDMQKIVDVNEKLVKELKDADR*

Ga0136993_10071181

Ga0136993_100711811

F000388

MKVIKVTKEYFQTEDEKIYFFEPLEKEISVEDMQKIVDANEKLVKELKDETNTISK*

Ga0136993_10074082

Ga0136993_100740822

F051532

KEKKYEEELAEDIMKILTCYSARFYGRRGGRKKKNTAENEPDESNGI*

Ga0136993_10075861

Ga0136993_100758612

F033769

MSTVNCGIKTATNTPTTVGVATGRKYLRLTNESLDMRCRAGDASISNEAGIIIEPGQTVEFRPLPSDNTDIYVMSEGKAVTLAFYEVIA*

Ga0136993_10076502

Ga0136993_100765023

F044014

MNDEYKPRFSFEITDEQKERADRLITTYGLRKAMFGQVLDDILDLIDEYGGVVIGIIASSKLKPREIIPSLKKAEEVGKHGNNR*

Ga0136993_10081622

Ga0136993_100816222

F092080

MQDKRITIRIPFEIWKGLRELQTMGKISSIQQAAVTGMDNLIQSLQADLGQNQREAATKRVLNILVEEKPFGSWEDVHRKRTDTDACRS*

Ga0136993_10089359

Ga0136993_100893592

F056958

MIMAEEVNIMTDAKPTHLTLADGKEYKLPPIDMTTLASIETTMGFGLGRLQYKLENETMTTMRSLIYALLKEEQPELDINTVGHLITLKEMTAVSTTISEIMALT*

Ga0136993_10111765

Ga0136993_101117652

F079636

YNINGNSSAYGKFIADASEEYNAYTIENANVTSADGTISTLGETQILAFDLVTDNSLVMPIRKEFEAVEDPTLLRRQKAGFFGWQECGFACLDSRMVGMGIIDRSL*

Ga0136993_10113796

Ga0136993_101137962

F088355

MKNKLSIFAGEKGQLILAILTIALFVLAAGAPNALGSVGR*

Ga0136993_10117859

Ga0136993_101178591

F105430

MTSAASQQFFDTFPPDIARGILEGRPLRIHAVRVSLVREAGSTGFAIDTL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300010411: Aquatic microbial communities from North Sea petroleum storage tank - Cell3b

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences