3300010259: Eastern black-and-white colobus group fecal microbial communities from Wisconsin, USA - Cm1022B metagenome

Overview

Basic Information

• IMG/M Taxon OID: 3300010259
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120398 | Gp0147152 | Ga0129316
• Sample Name: Eastern black-and-white colobus group fecal microbial communities from Wisconsin, USA - Cm1022B metagenome
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 118426464
• Sequencing Scaffolds: 1
• Novel Protein Genes: 1
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Animal Gut Microbial Communities From Fecal Samples From Wisconsin, Usa
• Type: Host-Associated
• Taxonomy: Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Eastern Black-And-White Colobus Group Fecal → Animal Gut Microbial Communities From Fecal Samples From Wisconsin, Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal distal gut

Location Information

• Location: USA: Wisconsin
• Coordinates
  • Lat. (^o): 43.78
  • Long. (^o): -88.79
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F013656	Metagenome	269	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0129316_1049521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	503

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0129316_1049521	Ga0129316_10495212	F013656	MKDKIYKEPLKSEEETTINVLYSENVLSIYTNKVGLQKQLNKLIGEPTKEDKIKRSIAGSRWEIPLSDKTRISRMVLKANLFEL*