3300010217: Sitobion avenae (English Grain Aphid) hemolymph microbial communities from Henan Dengzhou, China ? Region2

Overview

Basic Information

• IMG/M Taxon OID: 3300010217
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0121396 | Gp0154003 | Ga0136159
• Sample Name: Sitobion avenae (English Grain Aphid) hemolymph microbial communities from Henan Dengzhou, China ? Region2
• Sequencing Status: Permanent Draft
• Sequencing Center: DNAVision
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 204455793
• Sequencing Scaffolds: 4
• Novel Protein Genes: 4
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Aphidomorpha → Aphidoidea → Aphididae → Aphidinae → Aphidini → Aphis → Aphis → Aphis glycines	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Aphidomorpha → Aphidoidea → Aphididae → Aphidinae → Aphidini → Aphis → Aphis → Aphis craccivora	1
Not Available	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Sitobion Avenae (English Grain Aphid) Hemolymph Microbial Communities From Henan Dengzhou, China - Region2
• Type: Host-Associated
• Taxonomy: Host-Associated → Endosymbionts → Bacteria → Unclassified → Unclassified → Wheat → Sitobion Avenae (English Grain Aphid) Hemolymph Microbial Communities From Henan Dengzhou, China - Region2

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus

Location Information

• Location: Henan Dengzhou, China
• Coordinates
  • Lat. (^o): 32.68
  • Long. (^o): 112.08
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F029983	Metagenome	186	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0136159_1013496	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Aphidomorpha → Aphidoidea → Aphididae → Aphidinae → Aphidini → Aphis → Aphis → Aphis glycines	2716
Ga0136159_1035464	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Aphidomorpha → Aphidoidea → Aphididae → Aphidinae → Aphidini → Aphis → Aphis → Aphis craccivora	1049
Ga0136159_1046316	Not Available	785
Ga0136159_1071848	Not Available	779

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0136159_1013496	Ga0136159_10134961	F029983	VLFCCTVGYKWVIVMDDFKFEFNDIYNIVSLYKKNDS
Ga0136159_1035464	Ga0136159_10354641	F029983	VSLCCTIGYKWVTVMDCVQFEFNGIILLYKKNDFERRSASQPMILP
Ga0136159_1046316	Ga0136159_10463161	F029983	MQLCRTVDYKWVTVMGGITFEFNVIISLYPKNDSERRRF
Ga0136159_1071848	Ga0136159_10718481	F029983	VSLCCIEVYKWVAVMVGVKFEFNDIIPLHKKKRFW