NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300010216

3300010216: Freshwater aquifer microbial community from Bangor, North Wales, UK, enriched with nitrile substrate, replicate 3



Overview

Basic Information
IMG/M Taxon OID3300010216 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0121426 | Gp0154207 | Ga0136271
Sample NameFreshwater aquifer microbial community from Bangor, North Wales, UK, enriched with nitrile substrate, replicate 3
Sequencing StatusPermanent Draft
Sequencing CenterFidelity Systems Inc
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size59468341
Sequencing Scaffolds2
Novel Protein Genes3
Associated Families3

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani1
All Organisms → Viruses → Predicted Viral1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameFreshwater Microbial Communities Enriched With Nitrile Substrates
TypeEngineered
TaxonomyEngineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Freshwater → Freshwater Microbial Communities Enriched With Nitrile Substrates

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationBangor, North Wales, UK
CoordinatesLat. (o)53.23Long. (o)-4.13Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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