3300010018: Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #1 sample H1

Overview

Basic Information

• IMG/M Taxon OID: 3300010018
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120461 | Gp0149153 | Ga0133896
• Sample Name: Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #1 sample H1
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Maryland
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 220459630
• Sequencing Scaffolds: 19
• Novel Protein Genes: 22
• Associated Families: 17

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Echinodermata → Eleutherozoa → Echinozoa → Holothuroidea → Aspidochirotacea → Aspidochirotida → Stichopodidae → Apostichopus → Apostichopus japonicus	1
Not Available	11
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora millepora	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Black Band Disease Transitions
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Black Band Disease Transitions

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal surface

Location Information

• Location: Belize: Carrie Bow Cay Field Station
• Coordinates
  • Lat. (^o): 16.80288
  • Long. (^o): -88.08213
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000221	Metagenome / Metatranscriptome	1543	Y
F001193	Metagenome / Metatranscriptome	751	Y
F003767	Metagenome / Metatranscriptome	469	Y
F006175	Metagenome / Metatranscriptome	379	Y
F007917	Metagenome / Metatranscriptome	342	Y
F011560	Metagenome / Metatranscriptome	289	Y
F013645	Metagenome / Metatranscriptome	269	Y
F014703	Metagenome / Metatranscriptome	260	Y
F030666	Metagenome / Metatranscriptome	184	Y
F032924	Metagenome / Metatranscriptome	178	Y
F038987	Metagenome / Metatranscriptome	164	Y
F043216	Metagenome / Metatranscriptome	156	Y
F048764	Metagenome / Metatranscriptome	147	Y
F053793	Metagenome / Metatranscriptome	140	Y
F054574	Metagenome / Metatranscriptome	139	Y
F069681	Metagenome / Metatranscriptome	123	Y
F104455	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0133896_1000004	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	11552
Ga0133896_1001655	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	2191
Ga0133896_1005707	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Echinodermata → Eleutherozoa → Echinozoa → Holothuroidea → Aspidochirotacea → Aspidochirotida → Stichopodidae → Apostichopus → Apostichopus japonicus	1603
Ga0133896_1007409	Not Available	1491
Ga0133896_1010542	Not Available	1350
Ga0133896_1032623	Not Available	937
Ga0133896_1039514	Not Available	871
Ga0133896_1045181	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	827
Ga0133896_1049327	Not Available	798
Ga0133896_1049437	Not Available	797
Ga0133896_1053445	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora millepora	771
Ga0133896_1070816	Not Available	682
Ga0133896_1073147	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	671
Ga0133896_1090369	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	608
Ga0133896_1103495	Not Available	568
Ga0133896_1106733	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	559
Ga0133896_1110218	Not Available	550
Ga0133896_1111712	Not Available	546
Ga0133896_1128575	Not Available	506

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0133896_1000004	Ga0133896_10000042	F013645	MNPEFLFGTAFNIAYWHRKYHSGTMCKGVSNPQASNALSGCEKEENPK*
Ga0133896_1001655	Ga0133896_10016551	F007917	MSKEGIVCLLMILNVNTYVNVILERSFRANEGHIGVNESILTITKQIWAQLNGYFLRSKRCKNAL
Ga0133896_1004716	Ga0133896_10047161	F000221	CMTIQMKAIEQYFHVVLFIMLYKVVLTFKCMDETLVCDHSNESY*
Ga0133896_1005707	Ga0133896_10057072	F006175	MNFIVSFMYNKTIIRFSFCDIQNNHGLGKGYQPKPKAEADNPYLDLDYSGYHKNLIQ*
Ga0133896_1007409	Ga0133896_10074091	F053793	MAVQENLRPTYNEKILRAMQAERTVKRITFDRTEASPGETLYVSVPKLNKSEVLVPGSLAIRFDIDLSGGHANNFLVQNVTRALVDKMVVKFAGTTLEETVAHDL
Ga0133896_1010542	Ga0133896_10105421	F030666	MEICEEISFPSFFQKMLMSAFLMRFKANYPAKMRGYPNFSLWIPIALGEIYFFPRGPN
Ga0133896_1025677	Ga0133896_10256771	F000221	AIEQYFHVVLFIMLYKVVLTFKSVDKTLLCDHSNESC*
Ga0133896_1032623	Ga0133896_10326232	F054574	GGMLVHRRVTPSIKFAGTHLYTWVERGTVREKCLAQEHNLISLPKAQTQTP*
Ga0133896_1039514	Ga0133896_10395141	F014703	EQGLALQQLFPYKSYYSFKNSDRQKISFFNDGGLKLGHFDIFDMLFPFLAFVKL*
Ga0133896_1045181	Ga0133896_10451811	F104455	KKYELNLDHQILTGHGIFYPQALFNDLKFQITLAQAAQVVRGSDATKLKYRLANIELQYEIIESQTLAAEAESVLSSGKEFAYDHVMEADLIPIDRGNDKNFSIKLHDQRRSLKAILLLFVEGYAAGGRDSEKYVFPDLKKVSVTVNGVPNRLFNNGVEERDMWKMASRFFVRDKNKIENMNLTKFYTEDKFGLLIDMRSVAPQEIHGSGKRLVNSTDGVHLKIERDAKGSGVVNCHVFVISDAQFNIMGRQLESVQY*
Ga0133896_1049327	Ga0133896_10493271	F001193	ALPGFNDPARHVTPVFLFMHHFLYRFSTFIETMEKIDRSEV*
Ga0133896_1049437	Ga0133896_10494371	F032924	MIKILPLDFLVASYRTP*KNKNAVYRLQISALVPEIFVFEKYVKYANEMTHD
Ga0133896_1053445	Ga0133896_10534452	F038987	YKNVNFSRTKKDIPRRETPFFFTLKSLSKKQQLFLTS*
Ga0133896_1070816	Ga0133896_10708161	F043216	LREQIMSKDKYPSIFSRQMEAIVFIILQIFFETRAILKIGKYHSDIPHFFPIFDYVTSLDQSRVSENIR*
Ga0133896_1073147	Ga0133896_10731471	F048764	MAVPENLLPTYNEKILRGMKAERTVKRITFNPTEASPGETLYVSVPKLKESEVLVPGSLSLRFELDLSGGHANNFLVQNVTRALVDKMVVKFGGTTLEDTIGYDLFKIFQDLFLSQEKRDNMYLQGIQSEDLCKIRSG
Ga0133896_1090369	Ga0133896_10903691	F003767	AAAFIGGNYLARALGGGDKAALEEKERHDRALEAYQAAYAKYTRDRTKLLDWIETNAEIKAQAKQNFTNTDYAFKLYNQAHPDERMIPPKEPQFSDFYQPSEQQKNGELLFVGTGALALGYAAFRFL*
Ga0133896_1103495	Ga0133896_11034951	F006175	NKTIIRFGFCDIQNNQGLGKGYQPQPSASADNPYLDLDYSGYHKNLIQ*
Ga0133896_1106733	Ga0133896_11067332	F011560	ITISFVVRQSRVQVSASLANVGSLAVGAFDLVNSSLSVVGFVFVLVNVGQ*
Ga0133896_1110040	Ga0133896_11100401	F000221	VTIQVKAIEQYFHVVLFIMLYKVVLTFTCVDKTLVCDHSNESY*
Ga0133896_1110218	Ga0133896_11102181	F006175	SIYNKTIIRCFCDIQNNQGLGKGYQPQALAAADNPYLDLDYSGYHKNQI*
Ga0133896_1111712	Ga0133896_11117121	F030666	VRANSKEICEEITSTFFFRKMLISEFLLRFKPNYLEKICGYIQFSFWIPVALAKIYFFRMVLILSKEKSRHRP*
Ga0133896_1128575	Ga0133896_11285752	F069681	MSIYLGDVVFKDVLKSFHNLLQSEDGISMKKLDEDLDILWASKSGNVDLSKWSKDDFNSGLIPDYIDCKYFAGKPMVTNNFGCFAAKEK