3300010014: Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #2 sample H2

Overview

Basic Information

• IMG/M Taxon OID: 3300010014
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120461 | Gp0151265 | Ga0133899
• Sample Name: Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #2 sample H2
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Maryland
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 81186835
• Sequencing Scaffolds: 24
• Novel Protein Genes: 30
• Associated Families: 24

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium sp. clades → Symbiodinium sp. clade D → Durusdinium sp. D1 → Durusdinium sp. D1a	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora → Stylophora pistillata	2
Not Available	14
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Pocillopora → Pocillopora damicornis	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Black Band Disease Transitions
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Black Band Disease Transitions

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal surface

Location Information

• Location: Belize: Carrie Bow Cay Field Station
• Coordinates
  • Lat. (^o): 16.80288
  • Long. (^o): -88.08213
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000221	Metagenome / Metatranscriptome	1543	Y
F001105	Metagenome / Metatranscriptome	776	Y
F003577	Metagenome / Metatranscriptome	478	Y
F007159	Metagenome / Metatranscriptome	356	Y
F007917	Metagenome / Metatranscriptome	342	Y
F010768	Metagenome / Metatranscriptome	299	Y
F016769	Metagenome / Metatranscriptome	244	Y
F019780	Metagenome / Metatranscriptome	227	Y
F021048	Metagenome / Metatranscriptome	220	Y
F021922	Metagenome / Metatranscriptome	216	Y
F024478	Metagenome / Metatranscriptome	205	Y
F025646	Metagenome / Metatranscriptome	200	Y
F030664	Metagenome / Metatranscriptome	184	Y
F032532	Metagenome / Metatranscriptome	179	Y
F032533	Metagenome / Metatranscriptome	179	Y
F034460	Metagenome / Metatranscriptome	174	Y
F043217	Metagenome / Metatranscriptome	156	Y
F050896	Metagenome / Metatranscriptome	144	Y
F063338	Metagenome / Metatranscriptome	129	Y
F085124	Metagenome / Metatranscriptome	111	Y
F085125	Metagenome / Metatranscriptome	111	Y
F088257	Metagenome / Metatranscriptome	109	Y
F088258	Metagenome / Metatranscriptome	109	Y
F091321	Metagenome / Metatranscriptome	107	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0133899_1000050	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium sp. clades → Symbiodinium sp. clade D → Durusdinium sp. D1 → Durusdinium sp. D1a	2904
Ga0133899_1000388	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora → Stylophora pistillata	1392
Ga0133899_1000485	Not Available	1298
Ga0133899_1000923	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	1045
Ga0133899_1001427	Not Available	924
Ga0133899_1002391	Not Available	798
Ga0133899_1003253	Not Available	734
Ga0133899_1003689	Not Available	714
Ga0133899_1004257	Not Available	689
Ga0133899_1004422	Not Available	683
Ga0133899_1004629	Not Available	675
Ga0133899_1004777	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	669
Ga0133899_1004927	Not Available	665
Ga0133899_1004988	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Pocillopora → Pocillopora damicornis	663
Ga0133899_1006326	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	625
Ga0133899_1007543	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora → Stylophora pistillata	599
Ga0133899_1007645	Not Available	597
Ga0133899_1009047	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	572
Ga0133899_1010068	Not Available	558
Ga0133899_1011932	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae	535
Ga0133899_1013926	Not Available	515
Ga0133899_1014456	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	509
Ga0133899_1014466	Not Available	509
Ga0133899_1014571	Not Available	508

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0133899_1000050	Ga0133899_10000502	F010768	VDNGGKNVHPVPPPNSEIIERIRKRYESKRIKIEKLLTLGYTTSGDP*
Ga0133899_1000388	Ga0133899_10003881	F025646	MVSALVFRSSGPGLSPGRGHCAVFLGKTLYSHSASLHPGVLNGYR
Ga0133899_1000485	Ga0133899_10004851	F032533	FAKGLEFLHVVFNVIEKRGPVFLSLVFASFSSYNVCKNTWLFLAMSLGVYLLNSKQADCL
Ga0133899_1000485	Ga0133899_10004852	F024478	MSADPRSSKHYKSCRYEIKSKQPGSQIYVTIDRYLLAIIIFK*KKPKQSSYQFEKREQNVIAMHAGKGLYTSCAGKHGGRYKTNFISQKPVLAFQTLTLATLGKWATTHERVFFLGKNCSWTLLPGSI*LRTPITRLRYISYLRSFRTHFDSLKRADDLRVYRGFMMPLNHQAGTQGTLTQCLRY*
Ga0133899_1000923	Ga0133899_10009231	F030664	LNGNIFFEPFSTDLDERLASAGYKNDKEKKQNKTAEQADNISSRGFRHENENTAYFWINSALEASNRSQITFCILTNVLISISERFCPNFEQINISPAATAITVACILN*
Ga0133899_1001427	Ga0133899_10014271	F088257	NILAIFLQHLLKIRMIPSPVKHKQTKTTQQQIQGHLKKVDVSRFPVVSNEATKELNSVAVNKHSQNTPRSTKQ*
Ga0133899_1001427	Ga0133899_10014273	F043217	VVIELRGVQFWSEIILVISNRTRAARSFDFEIMHMISDQIALHSVQ
Ga0133899_1002391	Ga0133899_10023911	F021048	MVVLTIVTQKNGETIYFEEPIPKVHFMKLISCSLFNSWDTLKKEGSASLGDKDKYRALSISKLLPGYYDLESLAKEIEVLFAKYSYKLETEINQPAGQLIIKNFGVGTKPIELDRDLAGLLGIGRKLKTITFVKRITSLTTYFIHCNLIDEEKNLFNGKKSDVLALFDVKGKPF*
Ga0133899_1003253	Ga0133899_10032531	F088258	YESAAAPTSHSATDPAEFNVVCRTKPNLPNQTDSNAALLPFLTHQLGLAHEWSGVWNGPKPSNVLSCYPLLC*
Ga0133899_1003689	Ga0133899_10036891	F050896	CQSSPSSAILAPLWFIIIFLVFFHLIKLLFSGFLSFKGKFVGGQNNSKYRN*
Ga0133899_1004257	Ga0133899_10042572	F007917	MSRETIVYLLMILNVNTYVNVILERSLSQNEGHIGVNDSILTIIWTQMNGYFL*
Ga0133899_1004422	Ga0133899_10044221	F034460	MKPSKDLLHLRKTTRNTHKITNKLMTVASAEINLQSKHDRICHVAKVKAATSAHSMADVIPFF
Ga0133899_1004629	Ga0133899_10046291	F085125	MVIPFQIHSEKKRALKVAEHSFEVPMPNSPLLLNYLCFGTRFLQESRLTTQVFILAFWLRCVLLPWQRGWLKTRLKKWFLFI*
Ga0133899_1004777	Ga0133899_10047772	F001105	MSDNKLVKTIMDAATLTGLAAGIGWAAKKVVKENFTSDPSSSEMNYVQFTAVMAGSIALKKYLEDQKILPDSV*
Ga0133899_1004927	Ga0133899_10049271	F021048	MKLISCSLFNSWDTLKNEGSASLGDKDKDKVLSISKLLPGHYNLESLAKEIAGLFGKYGYKELKTEINQPVGQLVIKNFGTKPIELDRDLANLLGIGRKLKPITITFVKRLTSPTTYFIHCDLIDKEKNLFNSKKSDVLALFDVKGKPFEKVSYHGSPQQVLRDCSTDKFINSITISVKDENGELFDFKGFPLLFELELN*
Ga0133899_1004988	Ga0133899_10049881	F063338	MFLLVSGRHVGAHTDGHQHGVSIQISINLGKKFLHVSRIRKIAVTRILARVFAYLPSFISQILDFIYWPILILILI
Ga0133899_1006326	Ga0133899_10063261	F091321	MDQHLEEDTIFTLAATLHQVPTHTLQALDTPTARHLATAIEPPSHDHSWRVVPTTVLTKSKSSMKLPEEISELAVLVLRTL
Ga0133899_1007543	Ga0133899_10075432	F007159	VAPWLVHSSPDRAVRVRAMAGDIVLCSWARHFTVTVPLSTQVYKWVPANLMLGVT
Ga0133899_1007645	Ga0133899_10076451	F021922	MRTETEFNISVIIVTKMITYKFLRGFLLRIRDTSADGVFHLAILALLNTRQTLIAFH*
Ga0133899_1008767	Ga0133899_10087671	F000221	QMKAIEHYFHVVLVIMLCKVVLTFKSVDETLVCDHSNESY*
Ga0133899_1009047	Ga0133899_10090471	F016769	MIGQMAIVIALPKFNELGCSVTPTFLSRNRSYLQLSPHCLKMNKK
Ga0133899_1010068	Ga0133899_10100681	F032532	LDCNEIIVTHKLLDYNEFMLTHKLMDCNELIVTHKSFDCNEFIVTHRLLDCNELIVANKLFGYNEFIVTHKLLVSNGRILTQKLFDCNQFIVTLKLLDYIEFMLTHKLLDYNEFIVTYKLLDCNDFIVTRK*LDSNTFIVTHKLLYCNEIILTQKLLDYNEF
Ga0133899_1011932	Ga0133899_10119322	F007917	MSNEGIVFLLMILNVNAYVNVILERSLRANEGHIGVNESLLTIKKEIWTQMNIYFL*
Ga0133899_1012494	Ga0133899_10124941	F019780	VTLTAILLAAGTTIGAVIGVLTRGLKATGKALGNALKDIAAKLGSLLPGLIGSIVSFLFKAAGQVVGFLAEHTWLLILAAVAFLFEQYFKKQR*
Ga0133899_1013926	Ga0133899_10139261	F007917	MSKEGIVYLLMILNVKTFSSVILERSLRVNEGHIGVNESMLTIMKQIWTRMNGYFL*
Ga0133899_1014456	Ga0133899_10144561	F001105	VKTIVDAVILTGLAAGIGWIAKKVVKENFTADPSSSGMNYAKFTAVLAGSIAVKQYLEGKKILP
Ga0133899_1014466	Ga0133899_10144661	F003577	RGLRHFFSLKMKWGNMSAKKLNIERAVLFAVSISLKTKAIRR*
Ga0133899_1014571	Ga0133899_10145711	F085124	PIPRVDFMKLISCSLYNSWDTLKREGSATLGDKNKDIALSVGKLLPGHYSLERIAREIDNLFAKYNYKLETEINQPLGQLVIRNSGLRPIELDRDLAGLLGIGGNLKFITFVKRLTAPTSYFIH*
Ga0133899_1014906	Ga0133899_10149061	F000221	MKATEQNFHVVLFIMLYKVVLTFKSMDEILVCDHSNESY*A
Ga0133899_1015384	Ga0133899_10153841	F030664	MASAGYKNDQEKKQNKTAEQTDNISPRGFRHENENTAYFWINSALEATNWSHITFCILTNVLTSISERFCPNFEQINISPTAT