3300010011: Beer lees fermenting microbial communities from anaerobic reactor in biotech lab of the University of Hong Kong, China - sample2_75d

Overview

Basic Information

• IMG/M Taxon OID: 3300010011
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120356 | Gp0147050 | Ga0133925
• Sample Name: Beer lees fermenting microbial communities from anaerobic reactor in biotech lab of the University of Hong Kong, China - sample2_75d
• Sequencing Status: Permanent Draft
• Sequencing Center: Beijing Genomics Institute (BGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 92889813
• Sequencing Scaffolds: 3
• Novel Protein Genes: 4
• Associated Families: 3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Draft Genomes Reconstructed From Beer Lees Fermenting Consortia
• Type: Engineered
• Taxonomy: Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Reactor → Draft Genomes Reconstructed From Beer Lees Fermenting Consortia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): na → na → na

Location Information

• Location: Hong Kong
• Coordinates
  • Lat. (^o): 22.3964
  • Long. (^o): 114.1095
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F075996	Metagenome / Metatranscriptome	118	N
F088753	Metagenome / Metatranscriptome	109	N
F105007	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0133925_101117	All Organisms → cellular organisms → Bacteria	33019
Ga0133925_104604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	7150
Ga0133925_105870	Not Available	5335

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0133925_101117	Ga0133925_1011179	F075996	MLNSATGQAVGILLPFWSYIPTDRISPKGLLYPVSQVMKEGRLFRFVMLVGEPEEEVSLAGKDFFWQDTDRMYRPKYCAIDITADFKGRICTFTGLYARHDGLYVNGKRAGSFEDTRDIFVHYGLGEVWNLITGDIRPSCCVYKYGRLFVPETEVCLGLLSEKAQFPKGYDMKDLGRVERLLEDAGVFKIPEEISLAEVEEKLSKFSEIEKILDEFSAQDEETLLR*
Ga0133925_104604	Ga0133925_10460414	F075996	MDMINSATGQAVGILLPFWSYLPTNKVSPKGFLYPVSQVMKEGDVLRFVVLIGDAEDEAPLAGKDFFWQDVKRMFRPKFFCADMTVLFRDRMCNFTALYARKGGLFFNGRRAGDFADAGEVFAHYGLQEVWNLITGDIKPSCCVYKYGRLFVPETEVCLGLVSEKANFPKGYDMKDLARVEKLLEEAGAYKIPEEISLAEVEKKLSKFAEIEKFLDEFSSDRETLLR*
Ga0133925_105870	Ga0133925_1058702	F088753	MTECGRILQELEMLKKTNDERLARRLSDWYGFVLSELTSGRVGDFIRSVPADFVSLPFNGRKVEKLIQGCIRTLFEMAEDGRIPFETTAYMAESLRTGRKFWLRHAGQICSKKLGHALPVVLHKETITEMILREAKLLALSKVAVVIKLYCRIPGEFYPAVCCLSSDCDIAKRALRNITKDFVRDRMASFPKVDLKKDFFYLESGYGFDENGIIFINKGRVYYRTNDGTHELPDADLDNREGIYMKIASAVAKAIEYEVATEFEKEKYARDDDDWVLEIR*
Ga0133925_108013	Ga0133925_1080131	F105007	MEDADVLEGIHRKFCETGDISYRESDAVFRIAQRFFSRKSYLSLKDVVPKWYEKVKREILNGRWGVFVHTVPLGSTGDFYRNLGTTGDPINLASCLTEINYIFREMKRPVCINLVFLRDKDRLCTLGDGIPKTLLVKRFDKVNNKNAFRFLRADTLRRLGNFVCIDLEGIKAREFDIACAYRYEMEEKNCAVDRLAQVYAAVFLELESAGIKFLTCSSRAGYAYGYLDELSVFADEKDAERIEGALKTADCIAESLKGAVKEFSVRDFYLFSPAKDGEPSMNDPYFRKLVKSHISQFFPEKRKDAVEEEEWVDMIR*