3300010007: Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #4 sample T4

Overview

Basic Information

• IMG/M Taxon OID: 3300010007
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120461 | Gp0151273 | Ga0133909
• Sample Name: Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #4 sample T4
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Maryland
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 17714981
• Sequencing Scaffolds: 4
• Novel Protein Genes: 4
• Associated Families: 4

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
Not Available	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Black Band Disease Transitions
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Black Band Disease Transitions

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal surface

Location Information

• Location: Belize: Carrie Bow Cay Field Station
• Coordinates
  • Lat. (^o): 16.80288
  • Long. (^o): -88.08213
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F010974	Metagenome / Metatranscriptome	296	Y
F013645	Metagenome / Metatranscriptome	269	Y
F030664	Metagenome / Metatranscriptome	184	Y
F039942	Metagenome / Metatranscriptome	162	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0133909_100037	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	2041
Ga0133909_101080	Not Available	631
Ga0133909_101203	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	606
Ga0133909_102000	Not Available	523

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0133909_100037	Ga0133909_1000372	F013645	MKIEVNKIMNPAFLFGTAFNIAYWHKKYHSGTICKGVSNPHASNALSGCEKEEKPK*
Ga0133909_101080	Ga0133909_1010801	F039942	SPGLENIPLFAGNRAEVSQNHDARKAVSATLSVLKLSGAIFRPISSKVSVQKVLLCPFNCKLRPSEVSLASPGIENIRQLPGNRAEVGQNYDARKAVSATLSVLK*
Ga0133909_101203	Ga0133909_1012031	F030664	GLNDKEKKQNKTAEQADNISSRGFRHENENTAYFWINSALEASNRSQITFCILTNVLISISERFCPNFEQINISPAATAITVACILN*
Ga0133909_102000	Ga0133909_1020001	F010974	MKQSKDLLHLPKTARNTRKITNKLMTVASAEINLQSKHDLICHVAKVKAATSAHSMADVIPFFSVFIIPFKSNALIKRKENIFYPQKRKQYP*