3300009958: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 8

Overview

Basic Information

• IMG/M Taxon OID: 3300009958
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120337 | Gp0151214 | Ga0133742
• Sample Name: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 8
• Sequencing Status: Permanent Draft
• Sequencing Center: Autonomous University of Barcelona
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 6929565
• Sequencing Scaffolds: 8
• Novel Protein Genes: 15
• Associated Families: 13

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1
Not Available	2
All Organisms → cellular organisms → Bacteria	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → Candidatus Saccharimonia → Candidatus Nanosynbacterales → Candidatus Nanosynbacteraceae → Candidatus Nanosynbacter → unclassified Candidatus Nanosynbacter → Candidatus Nanosynbacter sp. TM7-076	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Oral Cavity → Saliva → Human Oral Cavity → Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal secretion

Location Information

• Location: Alicante,Spain
• Coordinates
  • Lat. (^o): 38.3852246
  • Long. (^o): -0.5132249
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F018385	Metagenome	235	Y
F036281	Metagenome	170	N
F049707	Metagenome	146	N
F051214	Metagenome	144	N
F067847	Metagenome	125	N
F071329	Metagenome	122	N
F074985	Metagenome	119	N
F081456	Metagenome	114	N
F081510	Metagenome	114	N
F095632	Metagenome	105	N
F105376	Metagenome	100	N
F105378	Metagenome	100	N
F105379	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0133742_10003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	68697
Ga0133742_10007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	53570
Ga0133742_10016	Not Available	35279
Ga0133742_10018	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	33597
Ga0133742_10177	All Organisms → cellular organisms → Bacteria	3895
Ga0133742_11084	All Organisms → Viruses → Predicted Viral	1416
Ga0133742_11471	Not Available	1112
Ga0133742_12187	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → Candidatus Saccharimonia → Candidatus Nanosynbacterales → Candidatus Nanosynbacteraceae → Candidatus Nanosynbacter → unclassified Candidatus Nanosynbacter → Candidatus Nanosynbacter sp. TM7-076	814

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0133742_10003	Ga0133742_1000364	F081510	MKLLDMKAVKAAAKTTYTTSKILTKKYAPFILLGVGLVGYGYSVYEGVKSGKKLEKTKAKYEELDQANIPYSKKEVVMDIAKDVAVPVAVATASTAAIVLGFAIQTNRLKAVSAALAMATEEHARYRLRAKTVLDEETFKKIDAPLKTKSVEIDGKEIEVESIVPNEGDFYGRWFKYSSNYASDDPEYNEAWVREVDNMMTTRISKVGMITFAEVLDALGFEVPKAALPFGWTDGEGFFLEWDTHEVWNDDKQEYEAQLYVRWKTPRNLYATTNFKDLMPKKTRKELN*
Ga0133742_10007	Ga0133742_1000714	F051214	MPGKIVAHDTHLRIDTEFIELKDCFEAFRRGVEYREKNDVDDILVICNAPDIIEYQLKNGDSFIVTYDPIHRIIVMRVFLHDEDITIKPIYIYNNREYQIACEFLRQIMHDKIDLKDEWIS*
Ga0133742_10007	Ga0133742_1000715	F071329	MLPVAKIIISGLSSIGAGMIASKLTKPLVSNANGIAKILLWFGSVGTGVAASAIVAREVELQFDTTVKAVQEARDHVEIED*
Ga0133742_10007	Ga0133742_1000717	F018385	MAEYENQWGPYKEHSIEKDRDPVLDDPIIYGVNTKHFTVTVYSQDGRVNKYWNARILKDDLGYCRIACPRDGKILCFNWVHWTAYMFTHDGLNELVFMPGSSRKTISRLYYEEVK*
Ga0133742_10007	Ga0133742_1000724	F067847	MFSHIIRVRGIFDDEPTTKKLYFHMSRREMFDFIKRYDNVTNFEKWLQAAIDNEDLYTMMKFFDDLIGTSYGERQGERFVKSEQIKESFLNSPEYEELFDQLMDNPSLVREFYKGILPEKIMKQVAEDPKYKELDSKLKETELKNL*
Ga0133742_10007	Ga0133742_1000728	F081456	MFEEPPIYYILISLIFLIVFGAISMATWMVWLTAISFFAKLVVTAIGFLLAAMTVILYTISAE*
Ga0133742_10007	Ga0133742_100078	F074985	MELTDGGWYKTPRIIKGKDFLAHIHDTYASGNAMYVEFKASEGEVRILEYQRLYEVDTESAVLFTINTCPQESILLKNIEEYEFIQYRPQKAWKAIHMGSTKRFNLEQFDQLWLDQTFQKLHPVIVNHDCKFWHVMGLKLDVDADGSFWGLYLKRQDSDFMKEIRMPLTQKFIYNPISGSWSLDDPTQEIKDLEEIKQTLRADAILDVTVSGVPMKLIRVQEIAKGVLFFVFQDEEKNKRYYYNRPAIKLRIVTDSKTGEQKYFLDHIKAMHID*
Ga0133742_10007	Ga0133742_100079	F036281	MITLIKVDEGPVDIYELRMQYLAKLKQTDGVMLPTFIYRNKDLFVTEFKPTCDDQWIMYMTNSEGLITKMRIKNGDLMSNGSVLFLAEERKIYNAKEYYDYWAAREGKPAPFFYEAKQYHVKSFMRVPGSTDLWITAERERGHWYTFRMSDDQNSKFTRHTMTNEKGHQSYDWVLENVEWAADTIRYF*
Ga0133742_10016	Ga0133742_100163	F105376	MNKNNEQPEVSAKEFGALGADVIHIKESVDRHTVTLERIENIARTNVTQAQLATHEKEAEEKYVKRTEIEGVMNFWKLVTSNLAKLFAIALVGLAIYATNNLIQQNKAVTELKEEVQTQVRSK*
Ga0133742_10018	Ga0133742_1001816	F095632	MTMSFKETTGYKVVSLVASTSASITAGAVVGALCPPAGVVLTAVYGVGSSVLGTYVGDKAGRQYAETLAETIDSMKTPSTN*
Ga0133742_10018	Ga0133742_1001837	F049707	VVSEYKSPHNDGHDPYILIWEYGNDIRRAEFVERWTDWDETGWTVWYFRLVGGGIMTFSTREWEQKDDVNHLTTIWMKPSLYDIERN*
Ga0133742_10177	Ga0133742_101773	F049707	VVSEYRSPHNDGHDPYILIWEYGTEVQQAEFVERWAEYEPDTGWTVWYFRLDDGRVMTFRALEWDQRDDVNHLTTIYFTPKRKAN*
Ga0133742_11084	Ga0133742_110842	F105379	MVIHFPLSQSDIESLLSISKLLKCDKILYDRNYINPIIGIGPEKSYFQTTSYMVDLSPHINNLLVNISDLKNLGKITQLEPSGDNPEIAIHKPVVSVFNWDAEYVKACMNSLREYQIDDNIITRTDEFHNTDCYNELMAGSASTGAFRINVGEYMIDIPKSAIPTLKSDHVVATVYNAPNKDFNVLRFKITKRNGIVVNQSMLFLPY*
Ga0133742_11471	Ga0133742_114712	F105378	MNVKVYVDKIKKWVQISSDEVLDINKNLSDLKDKEAAITNLGLYEKFISKEALESGFLPDVFTPDNIVTDSTHQFVTDEEKNKWNNKLNAPITMQDHLENNQIGYDSANSKFYIGLNNQNVLLGGSSCFDNIIVVNGFFSGNSQPTVIRNNKFNEAGQLITPVFVDVQCVEYTAGDLGEVSVSYTADAISIYNTGSFTGSFQCLIVYPLGSVNE*
Ga0133742_12187	Ga0133742_121871	F105376	MNEKPEVSAKEFGALWANVEHIKESVDRHTTTLERIENIARANVTQSQLKTYIAEHEKESEEKYVKRTEIEGVMNFWSLVTSNLAKLFAIALVGLAIYATNNLIQQNKAVTELQEEVQQTQVRRK*