3300009957: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 4

Overview

Basic Information

• IMG/M Taxon OID: 3300009957
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120337 | Gp0151210 | Ga0133738
• Sample Name: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 4
• Sequencing Status: Permanent Draft
• Sequencing Center: Autonomous University of Barcelona
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 5826987
• Sequencing Scaffolds: 4
• Novel Protein Genes: 8
• Associated Families: 7

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → Candidatus Saccharimonia → Candidatus Nanosynbacterales → Candidatus Nanosynbacteraceae → Candidatus Nanosynbacter → unclassified Candidatus Nanosynbacter → Candidatus Nanosynbacter sp. TM7-057	1
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Oral Cavity → Saliva → Human Oral Cavity → Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal secretion

Location Information

• Location: Alicante,Spain
• Coordinates
  • Lat. (^o): 38.3852246
  • Long. (^o): -0.5132249
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F027205	Metagenome	195	N
F036281	Metagenome	170	N
F051214	Metagenome	144	N
F074985	Metagenome	119	N
F076191	Metagenome	118	N
F081456	Metagenome	114	N
F105376	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0133738_10007	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	52171
Ga0133738_10017	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → Candidatus Saccharimonia → Candidatus Nanosynbacterales → Candidatus Nanosynbacteraceae → Candidatus Nanosynbacter → unclassified Candidatus Nanosynbacter → Candidatus Nanosynbacter sp. TM7-057	21401
Ga0133738_10557	Not Available	1448
Ga0133738_10727	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1283

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0133738_10007	Ga0133738_1000710	F027205	VASRLIVSADDILKAVKESEEFERKALSEARKRDRAEGKAPRETLYPNPDLKPGREIVLDYIKNPERRRTPRCSVHLEKRTANNSYRFIVDVSQVRNRELADEIEKDLFAFMDYLLDEYDIPRRIKRSTK*
Ga0133738_10007	Ga0133738_1000714	F051214	MPGKIVAHDTHLRIDTEFIELKDCFEAFRRGVEYREKNDVDDILVICNAPDIIEYQLKNGDSFIVTYDPIHRIIVMRVFLHDEDIAIKPIYIYNNREYQIACEFLRQVMHDKIDLKDEWIS*
Ga0133738_10007	Ga0133738_1000727	F081456	LGYRLFLEKGARMFEEPPIYYILISLIFLIVFGAISMATWMVWLTSIAFFAKLVVTAIGFLLCAMTVILYTISAE*
Ga0133738_10007	Ga0133738_100078	F074985	MELTDGGWYKTPRIIKGTDFLAHIHDTYASGNAMYVEFKASEGEVRILEYRRLYDVDTENAVLFTINTFLQESILLKNIEEYEFIQYRPQQAWKAIHMGSTKRINLEQFDQLWLDQTFQKLHPVIVNHDGKFWHVMGLKLDVDADGSFWGLYLKRQDSDFMKEIRMPLTQKFIYNPISGSWSLDDPTQEIKDLEEIKQTLRADAILDVTVSGVPMKLIRVQEIAKGVLFFVFQDEEKNKRYYYNRPAIKLRIVTDSETGEQKYFLDHIKAMHID*
Ga0133738_10007	Ga0133738_100079	F036281	MITLIKVDEGPVDIYELRMQYLAKLKETDGVMLPTFIYRNKDLFVTEFKPTCDDQWIMYMTNAEGLITKMRIKNGDLMSNGSVLFLAEERKTYNAKEYYDYWSAREGKPAPFFYESRQYHVKSFMRVPGSTDLWITAERETGHWYTFRMSDAQKSKFTRHTMTNEKGHQSYDWVLENVEWAADTIRYF*
Ga0133738_10017	Ga0133738_1001727	F105376	MNEQPEVSAKEFGALQAKVEYIKDGVDKHTVMLERIENIARDNVTQAQLKTYIAEHEKESEEKYVKRTEIEGVMNFWSLVTSNLAKLFAIALVGLAIYATNNLIQQNKAVTELKEEVQQTQVRRK*
Ga0133738_10557	Ga0133738_105572	F105376	MGKIMNEKPEVSAKEFGALQAKVEYIKDGVDKHTVMLERIENIARANVTQAQLKTYIAEHEKESEEKYVKRTEIEGVMNFWSLVTSNLAKLFAIALVGLAIYATNNLIQQNKTVTELQEEVQQSQVRRK*
Ga0133738_10727	Ga0133738_107273	F076191	MKIIAENPAEEALLWRIKALSDELVNQDNRSTDMPVWTILDNNKAGKDYGAVMYFTGKAAEQHIKENDHHYDNPMIYVRSAHDNRELKDVIHLLILAGGNEIPSNHYGTLRDA*