3300009955: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 18

Overview

Basic Information

• IMG/M Taxon OID: 3300009955
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120337 | Gp0151221 | Ga0133748
• Sample Name: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 18
• Sequencing Status: Permanent Draft
• Sequencing Center: Autonomous University of Barcelona
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 5666334
• Sequencing Scaffolds: 2
• Novel Protein Genes: 5
• Associated Families: 5

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Oral Cavity → Saliva → Human Oral Cavity → Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal secretion

Location Information

• Location: Alicante,Spain
• Coordinates
  • Lat. (^o): 38.3852246
  • Long. (^o): -0.5132249
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F018385	Metagenome	235	Y
F036281	Metagenome	170	N
F043991	Metagenome	155	N
F049707	Metagenome	146	N
F074985	Metagenome	119	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0133748_10003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	57486
Ga0133748_10012	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	29391

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0133748_10003	Ga0133748_1000352	F049707	VVSEYRSPHNDGHDPYILIWEYGTEVQQAEFVERWAEYEPDTGWTVWHFRLEDGRVMTFRALEWEQRDDVNHLTTIYFVPKRKEN*
Ga0133748_10012	Ga0133748_1001224	F018385	MMAEYENQWGPYKEHSIEKDRDPVLDDPIIYGVNVKHFTVTVYSQDGRVNKYWNARILKDDLGYCRIACPRDGKILCFNWIHWTTYMFTHDGLNELVFMPGSSRKTISRLYHEEVK*
Ga0133748_10012	Ga0133748_1001229	F043991	MSQRDKSVIDYFDLNGDLNEEAYEFEDVKLEEYIDKRSNIKPSWVGKYSHQLHFDLADDTEVSFYKGLNIVYADINFAGGIRTILFKCRQKKNLTRFISRVLEIAQGDPSNVHPDFRA*
Ga0133748_10012	Ga0133748_1001233	F036281	MITLIKVDEGPVDIYELRMQYLAKLKETDGVMLPTFIYRNKDLFVTEFKPTCDDQWIMYMTNADGLITKMRIKNGDLMSNGSVLFLAEERKTYNAKEYYDYWTAREGKPAPFFYEARQYHVKSFMRVPGSTDLWITAEREKDHWYTFRMSDAQKSKFTRHTMTNEKGHQSYDWVLENVEWAADTIRYF*
Ga0133748_10012	Ga0133748_1001234	F074985	MELTDGGWYKTPRIIKGKDFLAHIHDTYASGNAMYVEFKASEGEVRILEYQRLYDVDTESAVLFTINTFPQESILLKNIEEYEFIQYRPQQAWKAIHMGSTKRINLEQFDQIWLDQTFQKLHPVIVNHDGKFWHVMGLKLDVDADGSFWGLYLKRQDSDFMKEIRMPLTQKFIYNPISGSWSLDDPTQEIKDLEEIKQALRADAILDVTVSGVPMKLIRVQEIAKGVLFFVFQDEEKNKRYYYNRPAIKLRIVTDSETGEQKYLLDHIKAMHID*