Basic Information | |
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IMG/M Taxon OID | 3300009719 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0110190 | Gp0141789 | Ga0123383 |
Sample Name | Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_260_2m (Metagenome Metatranscriptome) |
Sequencing Status | Permanent Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 7033440 |
Sequencing Scaffolds | 10 |
Novel Protein Genes | 13 |
Associated Families | 12 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata | 2 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio harveyi group → Vibrio parahaemolyticus | 1 |
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum | 1 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus | 1 |
All Organisms → Viruses | 1 |
Not Available | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium | 2 |
Ecosystem Assignment (GOLD) | |
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Name | Microbial And Viral Regulation Of Community Carbon Cycling Across Diverse Low-Oxygen Zones |
Type | Environmental |
Taxonomy | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Microbial And Viral Regulation Of Community Carbon Cycling Across Diverse Low-Oxygen Zones |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | marine biome → marine water body → sea water |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
Location Information | ||||||||
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Location | Louisana Shelf, Hypoxic Zone, Gulf of Mexico | |||||||
Coordinates | Lat. (o) | 28.8679 | Long. (o) | -90.4764 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map | ||||||||
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