3300009394: Microbial communities of red sea marine sponge, Stylissa carteri from the coast of Thuwal, Saudi Arabia - rep 3

Overview

Basic Information

• IMG/M Taxon OID: 3300009394
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117970 | Gp0126342 | Ga0103753
• Sample Name: Microbial communities of red sea marine sponge, Stylissa carteri from the coast of Thuwal, Saudi Arabia - rep 3
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Wuerzburg
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 160207178
• Sequencing Scaffolds: 30
• Novel Protein Genes: 32
• Associated Families: 17

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	25
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae → Abscondita → Abscondita terminalis	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	1
All Organisms → cellular organisms → Bacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Microbial Communities Of Red Sea Marine Sponge, Stylissa Carteri From The Coast Of Thuwal, Saudi Arabia
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Microbial Communities Of Red Sea Marine Sponge, Stylissa Carteri From The Coast Of Thuwal, Saudi Arabia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus

Location Information

• Location: coast of Thuwal, Saudi Arabia
• Coordinates
  • Lat. (^o): 22.23
  • Long. (^o): 39.03
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001293	Metagenome / Metatranscriptome	729	Y
F001806	Metagenome / Metatranscriptome	631	Y
F007683	Metagenome / Metatranscriptome	346	Y
F013612	Metagenome / Metatranscriptome	269	Y
F015565	Metagenome / Metatranscriptome	253	Y
F017963	Metagenome / Metatranscriptome	237	Y
F022150	Metagenome / Metatranscriptome	215	Y
F024258	Metagenome / Metatranscriptome	206	Y
F031452	Metagenome / Metatranscriptome	182	Y
F035204	Metagenome / Metatranscriptome	172	Y
F038110	Metagenome / Metatranscriptome	166	Y
F039149	Metagenome / Metatranscriptome	164	Y
F041044	Metagenome / Metatranscriptome	160	Y
F059684	Metagenome / Metatranscriptome	133	Y
F073151	Metagenome / Metatranscriptome	120	Y
F093358	Metagenome / Metatranscriptome	106	N
F098755	Metagenome / Metatranscriptome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0103753_1000491	Not Available	4302
Ga0103753_1003560	Not Available	2136
Ga0103753_1003661	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	2108
Ga0103753_1007949	Not Available	1516
Ga0103753_1007955	Not Available	1516
Ga0103753_1009030	Not Available	1427
Ga0103753_1010261	Not Available	1342
Ga0103753_1012992	Not Available	1191
Ga0103753_1015304	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae → Abscondita → Abscondita terminalis	1098
Ga0103753_1016019	Not Available	1072
Ga0103753_1016155	Not Available	1068
Ga0103753_1020926	Not Available	938
Ga0103753_1024346	Not Available	868
Ga0103753_1024490	Not Available	865
Ga0103753_1026549	Not Available	830
Ga0103753_1029368	Not Available	788
Ga0103753_1030169	Not Available	777
Ga0103753_1030170	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	777
Ga0103753_1033823	Not Available	732
Ga0103753_1034732	Not Available	722
Ga0103753_1037944	Not Available	688
Ga0103753_1042078	Not Available	652
Ga0103753_1042560	Not Available	648
Ga0103753_1047274	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	612
Ga0103753_1047740	Not Available	609
Ga0103753_1048912	All Organisms → cellular organisms → Bacteria	601
Ga0103753_1050988	Not Available	588
Ga0103753_1051133	Not Available	587
Ga0103753_1055846	Not Available	560
Ga0103753_1068182	Not Available	501

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103753_1000491	Ga0103753_10004914	F007683	MSFPAMSSGLRFCGTGGGRWVHLRGANNMAASGLVFRSDLVGTGRAISILFDINGVRNKRSHLVGPPFPE
Ga0103753_1003560	Ga0103753_10035601	F007683	MGLRFCVSRKGGTAHDGRVWAHLRNDLVGTGRAIAVLFGINGVRNKRSHLVGP
Ga0103753_1003661	Ga0103753_10036611	F007683	MSLGLRFCVSGKGRIGGGANSMAASGLVLRSDLVGTGRAISIYFGINGVRNKRSHLVGPP
Ga0103753_1007949	Ga0103753_10079491	F017963	VHLKGANSMAASGLVSRNNLVGTGRAISVLFGLNGVRNKQSHLVGPLLSVFKARFSATASWHFLRDLTRRLLIGGCGHGHVSVKYG*
Ga0103753_1007955	Ga0103753_10079551	F038110	MIEGCSPAVSEDKGHTSNVDGPEALVISIGDVSYKLMNLKIILLLIHCVVDMRTSQARLSYLAMSERYRIVRVMVSEDR*
Ga0103753_1009030	Ga0103753_10090301	F041044	MPKKTEMALPVPTKSFLQPSPDATKLFAPFGCTHPPTPVPPSLLTQNLSPKDIAGSDIMKLK
Ga0103753_1010261	Ga0103753_10102611	F093358	KIILLLIHCLVDMPTSQAWLSYLVMSKRYRIVRVMVSEDR*
Ga0103753_1012992	Ga0103753_10129921	F031452	MADFGEIVDGTFVLSPEQVEIRKYGFSEIKASGIPTIYHAGDVVNLPYTTGKTSTIEAIGLAWSAFSSGIGPV*
Ga0103753_1015304	Ga0103753_10153041	F015565	MLFCAKTIVKDSHKFELARLKKKKKKEKHFGRLATFWFGAFAMLFSATGCVFRHENTRK*
Ga0103753_1016019	Ga0103753_10160192	F093358	YKLMNLKIILLLIHCLVDMPTSQARLSYLVMSERYCIVRVMVSKDR*
Ga0103753_1016155	Ga0103753_10161551	F024258	MRLYVNCACATGTGLKLDLLCIAQNGVVLELHKTTASQNCYSCQFADKRDEKGYYDESNVILCVN*
Ga0103753_1020926	Ga0103753_10209261	F007683	MSLPAMSLGLRFSVSRKGRTGGTGESGWGHPKGANRMAVSGLIFKSNLVGTGRAISIQFGINGVRNKRSHFGGP
Ga0103753_1024346	Ga0103753_10243461	F022150	VRNQRSHLVGPPFPEFKARFSATAGWHFSSDLARRLLIGRCGHSHVSVKYG*
Ga0103753_1024490	Ga0103753_10244902	F017963	MAASGLVFRSDLVGTGRAISILFGINGVRNQRSHLVGPPFPEFKARFSATAGWHFSRDLTRHLLIGGCGQSRI*
Ga0103753_1024490	Ga0103753_10244903	F022150	RSHLVGPPFPEFKARFSATVGWHFSRDLTRRLLIGGCGQIHVFAKHG*
Ga0103753_1026549	Ga0103753_10265491	F007683	MSLPAMSLGLRFCVSRKGGTGGGGWVHPKGANSMAASGLVLRSDLVGTGRAISVLFGINGVRNK*
Ga0103753_1029368	Ga0103753_10293681	F035204	MPPCEPVFQVIESGCDGENLEKLSMESTVLNVHYVIHIIRYHVTLMRPD*
Ga0103753_1030169	Ga0103753_10301691	F013612	MSLPAMSFRESRKGRIGIGGDGLVHQKGANSMAVSGLISRKNLVGTGRARVRNKRSHLVRPPFPVFKARFSATAGWHFSRDLTRRLLIGGC
Ga0103753_1030170	Ga0103753_10301702	F001293	LICKLINVQASINANNEKKIKNEDEISKLTKAPPKDTAALDKRSVLAKVNSQGSGR*
Ga0103753_1033823	Ga0103753_10338231	F098755	YHSYDFEMDTEKQRQCRRDDARLTESRNARSEQLLMVLLESLTNRVWLSGELLSGSEHRRPSWFLDMKYQAC*
Ga0103753_1034732	Ga0103753_10347321	F013612	MSLLAMSFGDRFYFSRKGRIGIGGGGLVHPKGANSMAASGLISRNDLVGIGRAISLLFGVSGVRNKQSHLVGLPFPVFKACFSATAGWHFSRDLTRRLLIGECGHGHVSVKYG*
Ga0103753_1037944	Ga0103753_10379441	F073151	MQNTKFWHFSSYGHFKAVMASDFILGLWAHQTICFTNPTAIDSLLSEVVAIKPEV*
Ga0103753_1042078	Ga0103753_10420781	F017963	ICACLERSDLVGTLRAISILFGINSVRNKRFHLVGPPFPEFKARFSAMAGWHFSRDLTRCLLIGGWGQSHVSAKHD*
Ga0103753_1042560	Ga0103753_10425601	F017963	MAASGLVFRSDLVGTGRAISILFAINGVRNQRSHLVEPPFTEFKARFSATIGWHFSRDLTRRLLIGGCSQSHVFAKHG*
Ga0103753_1042560	Ga0103753_10425602	F017963	MAASGLVFRSDLVGTGRAISILFGINGVRNQRSHLVGPPFPEFKARFSATVGWHFSRDLTRRLLIGGCGQIHVFAKHG*
Ga0103753_1047274	Ga0103753_10472741	F001806	MDAGTRQKRVEGLEAIKNKALSMAEEGVDSLEVRDFVTAAKKELAYELPDEDAFQKAAKAVIAYRRKQGE*
Ga0103753_1047740	Ga0103753_10477401	F035204	VIESGRDGENLEKLSMETIVLNVHYVIHIIVFHVTLMRPD*
Ga0103753_1048912	Ga0103753_10489122	F039149	MAINSNQLHVAKIYPGNYTNVLRYWHEEKSVAFQNANGVDTTFTNQPVGGPVGVVFQPGWIAQQAVGYVDLSYQALGTNNQLSYYTKPYGSGQNSAEQPFLNADVIVPSPDFHKDVRADITDGIKVP
Ga0103753_1050988	Ga0103753_10509881	F022150	INGVRNQRSHLVGPPFPEFKARFSATAGWHFERDLTRRLLIGGCGQGNISAKHG*
Ga0103753_1051133	Ga0103753_10511331	F015565	MLFCAKAIVKESRKFELARLKKKKKEKHFGRLATFWLGPFAMLFSATGCVFRHENTRK*
Ga0103753_1055846	Ga0103753_10558461	F017963	MAASGLVFRSDLVGTGRAISILFGINGVRNQRSHLVGPPFPEFKARFSATVGWHFSRDLTRRLLIGGCGQSHISAKHG*
Ga0103753_1068182	Ga0103753_10681822	F059684	VTRKCRNLTVSDLEVAVESRKLAYIVHFTSDKAVARSRRQSRD