3300008994: Microbial communities of red sea marine sponge, Stylissa carteri from the coast of Thuwal, Saudi Arabia - rep 1

Overview

Basic Information

• IMG/M Taxon OID: 3300008994
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117970 | Gp0126340 | Ga0103751
• Sample Name: Microbial communities of red sea marine sponge, Stylissa carteri from the coast of Thuwal, Saudi Arabia - rep 1
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Wuerzburg
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 131058234
• Sequencing Scaffolds: 18
• Novel Protein Genes: 21
• Associated Families: 16

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	1
Not Available	16

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Microbial Communities Of Red Sea Marine Sponge, Stylissa Carteri From The Coast Of Thuwal, Saudi Arabia
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Microbial Communities Of Red Sea Marine Sponge, Stylissa Carteri From The Coast Of Thuwal, Saudi Arabia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus

Location Information

• Location: coast of Thuwal, Saudi Arabia
• Coordinates
  • Lat. (^o): 22.23
  • Long. (^o): 39.03
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001926	Metagenome / Metatranscriptome	616	Y
F010384	Metagenome / Metatranscriptome	304	Y
F013612	Metagenome / Metatranscriptome	269	Y
F015565	Metagenome / Metatranscriptome	253	Y
F017963	Metagenome / Metatranscriptome	237	Y
F020857	Metagenome / Metatranscriptome	221	Y
F035204	Metagenome / Metatranscriptome	172	Y
F038110	Metagenome / Metatranscriptome	166	Y
F041044	Metagenome / Metatranscriptome	160	Y
F049434	Metagenome / Metatranscriptome	146	Y
F063409	Metagenome / Metatranscriptome	129	Y
F069743	Metagenome / Metatranscriptome	123	Y
F074458	Metagenome / Metatranscriptome	119	Y
F076933	Metagenome / Metatranscriptome	117	Y
F098755	Metagenome / Metatranscriptome	103	Y
F098759	Metagenome / Metatranscriptome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0103751_1001542	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	2425
Ga0103751_1002003	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	2180
Ga0103751_1003625	Not Available	1730
Ga0103751_1004151	Not Available	1639
Ga0103751_1005797	Not Available	1426
Ga0103751_1008704	Not Available	1189
Ga0103751_1013618	Not Available	965
Ga0103751_1014190	Not Available	948
Ga0103751_1015462	Not Available	910
Ga0103751_1016475	Not Available	884
Ga0103751_1016740	Not Available	877
Ga0103751_1018630	Not Available	834
Ga0103751_1018961	Not Available	827
Ga0103751_1025606	Not Available	714
Ga0103751_1029484	Not Available	666
Ga0103751_1043165	Not Available	549
Ga0103751_1044368	Not Available	542
Ga0103751_1051544	Not Available	501

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103751_1001542	Ga0103751_10015421	F098759	MLDLSLLTRLRPRLSLPTFVTQGYSALFASILSGESKELVTTMKALYSGEKALGVISIRLV*
Ga0103751_1002003	Ga0103751_10020033	F063409	PPCSLAKFIFNETAAVQGIIIQPCSGIVTDSIQAIMQLLQGVVTYMSPVEAFATGIKNFDRWKLSLIAPF*
Ga0103751_1003625	Ga0103751_10036253	F013612	VSRKGGTGGGGWVHPKGANSMAASGLVFRSDLVGTGRAISILFGINGVRNQRSHLVGPPFPEFKARFSATVGWHFSRDLTRRLLIGGCGQSHVFAKHG*
Ga0103751_1004151	Ga0103751_10041512	F020857	VPSILSAIKDWDLAATSDIFVLFLQDYCALQELLVKMNFTIAVAPPFVHPMTSLPAMPTHSVRKYGFFSEPTWRRQVAKYGNLKHCESLSFSGDIESLEPSKF*
Ga0103751_1005797	Ga0103751_10057972	F001926	VRHEDIPDINNPKIMKATLEGDKLMKEVLNGGYNVHPVPPPNSETREKIMRKYERKRTEIEKLFILGYTTSGDP*
Ga0103751_1008704	Ga0103751_10087041	F013612	MKSLLAMSLGLRFCVSRKGGTGGGGWVHLKGANSMAASGLVFRSDLVGTGRAISILFGINGVRNQRSHLVGPPFPEFKACFSATAGWHFLERLN*
Ga0103751_1013618	Ga0103751_10136181	F069743	MQSHTIRLSIAPGDYGAVTDFPLGPFSNSVRQLSFNVSIVNDMIPEDDETFIANLTLLPADQARLRNRVTVQPDSATVTILDDEGTTVIDNYISNQNLKRNTWTTTYVVF*
Ga0103751_1014190	Ga0103751_10141902	F035204	RGADGENLENLSMEATVLNVHYVIHSIGLHVTFNET*
Ga0103751_1015462	Ga0103751_10154621	F015565	KTIMKESCKFELARLKKKKKKEKHFGRLATFWFGTFVMLFSATGCVVCHEKSRR*
Ga0103751_1016475	Ga0103751_10164751	F038110	MVEVCSPAVSEDRGHMSKVDGPESLAISIRDVSYKLMNLKIILLLIHCLVDMPTSQARLSYLVMSERYRI
Ga0103751_1016740	Ga0103751_10167401	F041044	RIEMALPVPTKSLLKMSPDTAMLFAPFRCTHPPPPVPHFLLMQNQSPKDIAGSDTL*
Ga0103751_1017079	Ga0103751_10170791	F076933	MIYANCGAIAVITSMTYMTIVELFDEFSTRFSPEVIRSLIVPPTSILNDIILSMETERSAKACC*
Ga0103751_1018630	Ga0103751_10186301	F041044	MPERTELALPVPTKSLLETSPDAAMLFAPFGCAHPPSPVLPFLLMQNLSPKDVAGSHIIKLKVS*
Ga0103751_1018961	Ga0103751_10189613	F010384	MQLRLGIWKRFVRSLLVVDRISLSWRSGRGLLEIDYWWTESASAGDLEEIY*
Ga0103751_1021500	Ga0103751_10215002	F049434	MKTLEDGWYVVINAYKFTVFVIWGEIFVLSYIACPCYPYIRVYRLYDKMAFTQHTNRQVD
Ga0103751_1025606	Ga0103751_10256061	F035204	MPPCKPVFQVIESGCDGENLVKLSMETTVLNVHYVIHIVGFHV
Ga0103751_1029484	Ga0103751_10294841	F074458	MRSLTAKWFFEMAGIPSVAFVFDDNLATELETYAEANVELMSRVANIALASGNTFSESGLLHW*
Ga0103751_1034050	Ga0103751_10340501	F076933	MIYANCGAIAVITSTTYMTIVELFDEYSTPFSPEVIRSLIMTLTSILNDIILSMETGRSTKACC*
Ga0103751_1043165	Ga0103751_10431652	F098755	MDTEKQRRCRRDDERLTESGDDRSEQLLVMPTESLLTNGEWLPGELLGGSERRTPGWFLDMNIRLVE*
Ga0103751_1044368	Ga0103751_10443681	F015565	MLLFCSKTIVKGLRKFELACLKKKKKEKHFGHLATFWFGTFAMLFSATGCVVRHENT*
Ga0103751_1051544	Ga0103751_10515441	F017963	MAASGLVFRSDLVGTGRAISILFGINGVRNQQSHLVGPPFPEFKAHFSATAGWHFSRDLTRRLLIGGCGQSHVF