3300008920: Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NA2

Overview

Basic Information

• IMG/M Taxon OID: 3300008920
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117944 | Gp0126074 | Ga0103485
• Sample Name: Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NA2
• Sequencing Status: Permanent Draft
• Sequencing Center: Sodertorn University
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 17087757
• Sequencing Scaffolds: 9
• Novel Protein Genes: 10
• Associated Families: 10

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Predicted Viral	2
Not Available	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Microbial Communities Of Nutrient Treated Water From Blanes Bay, Barcelona, Spain
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Bay Water → Microbial Communities Of Nutrient Treated Water From Blanes Bay, Barcelona, Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine biome → bay → sea water
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Barcelona, Spain
• Coordinates
  • Lat. (^o): 41.666
  • Long. (^o): 2.8
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001293	Metagenome / Metatranscriptome	729	Y
F001926	Metagenome / Metatranscriptome	616	Y
F005505	Metagenome / Metatranscriptome	398	Y
F009426	Metagenome / Metatranscriptome	318	Y
F011139	Metagenome / Metatranscriptome	294	Y
F065812	Metagenome / Metatranscriptome	127	Y
F076161	Metagenome / Metatranscriptome	118	N
F085736	Metagenome / Metatranscriptome	111	Y
F097453	Metagenome / Metatranscriptome	104	N
F103885	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0103485_100092	All Organisms → Viruses → Predicted Viral	2743
Ga0103485_100245	All Organisms → Viruses → Predicted Viral	1928
Ga0103485_100654	Not Available	1223
Ga0103485_101713	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	766
Ga0103485_102418	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	633
Ga0103485_102564	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida	616
Ga0103485_102918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1	578
Ga0103485_103324	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	542
Ga0103485_103671	Not Available	517

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103485_100092	Ga0103485_1000926	F103885	MNNLLQSIKPKYIKLINESNYRFTSTKILAKLESSKFYGDLTISEIRDIYDMCNINALRVSAWDYRFGDNLLIDEND*
Ga0103485_100245	Ga0103485_1002451	F097453	MYDLILRDVEEVFGASPWSSLNIKTYPVNYQGSKGSSTEYVLINVLPSSSRNYAYGVKKETTGLVAVKIFVKAGDGQGRLMAIANSLDTVLDNKTLSNGTKLGTSYLTVEGLDPANKSLYSASYII
Ga0103485_100654	Ga0103485_1006542	F001926	VRHEDTPDINNPKTIKDTLEGDKLIKEVLNGGYNVHPVPPPNSETKERSARKYERKRTKIERLFTLGYTTSGDP*
Ga0103485_101713	Ga0103485_1017132	F001293	MIRNSLICKLINVQASMKENNEKKIKNEDEISKLTKAPPKDTAALDNRSVLAKVNSQGSGT*
Ga0103485_102418	Ga0103485_1024181	F005505	MHHLEGGTVNYFYFER*NISEFDEIRFYGVAPHWYFRPFMGLLTISPTHYEGLM*FGL*LILLAFLPLVHNFYNPYNRYLAVIPMQNSMIQSLGFLGFMLSLYCASSMLPCGRYYYEPEGGYVGNP*VKFSYQYCYLYMM*IMHHLDTVDHYLSQFSQPAKSKQTLNPRLGVTSYRTEAMKDYRY*
Ga0103485_102425	Ga0103485_1024251	F085736	ENVYEDKSGSYIS*FYDAFLKEIQDA*Y*VNFVFLYFFYHHLTPATVSYYFFER*NISELDEIRFYAVAPH*YFRAFMGLLVVSPSHYEGLL*MGLFLALLATLPVIYNCYNSNNTYLPVIPMQSSLFQTLSFMFFMMSLYCVASMLPCGRYYYEPEGGYVGNP*VKFSYQYMYLYLG*FLHHLDLIESYPFQFIQNFERRRPSYKSLAN
Ga0103485_102564	Ga0103485_1025641	F065812	NICRKPIANKYCEGKMKSTLKRELEDLKSLRRKR*
Ga0103485_102918	Ga0103485_1029181	F076161	LTPRNRRAEAHRFMKTINFSSRCPKTGFRAFAEKPAAKSLLLPQFGGQKMPPQGASIPNRLTAWTVPQITADPKERNNLLSSPTNPDAPTGKPV*
Ga0103485_103324	Ga0103485_1033241	F011139	MGVLTISPTHYEGLMWFALWLILLAFLPTINTFYNPYNRYLAAIPMQNSLLQTTFFILFMMSLYCAASMLPCGRYYYEPEGGYVGNP*
Ga0103485_103671	Ga0103485_1036711	F009426	EIRSAREIELAAAKVNKDVKPSSDMIPREILYTIILFMTTSPCVISAGAARETLFEGKADYCMIVCE*