3300008918: Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - KB2

Overview

Basic Information

• IMG/M Taxon OID: 3300008918
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117944 | Gp0126072 | Ga0103483
• Sample Name: Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - KB2
• Sequencing Status: Permanent Draft
• Sequencing Center: Sodertorn University
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 38523772
• Sequencing Scaffolds: 7
• Novel Protein Genes: 13
• Associated Families: 12

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	5
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Microbial Communities Of Nutrient Treated Water From Blanes Bay, Barcelona, Spain
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Bay Water → Microbial Communities Of Nutrient Treated Water From Blanes Bay, Barcelona, Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine biome → bay → sea water
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Barcelona, Spain
• Coordinates
  • Lat. (^o): 41.666
  • Long. (^o): 2.8
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000155	Metagenome / Metatranscriptome	1877	Y
F000237	Metagenome / Metatranscriptome	1498	Y
F007607	Metagenome / Metatranscriptome	348	Y
F009426	Metagenome / Metatranscriptome	318	Y
F019484	Metagenome / Metatranscriptome	229	Y
F020014	Metagenome / Metatranscriptome	226	Y
F021468	Metagenome / Metatranscriptome	218	Y
F030453	Metagenome / Metatranscriptome	185	Y
F063388	Metagenome / Metatranscriptome	129	Y
F074917	Metagenome / Metatranscriptome	119	N
F085736	Metagenome / Metatranscriptome	111	Y
F097453	Metagenome / Metatranscriptome	104	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0103483_1001848	Not Available	1038
Ga0103483_1002042	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	979
Ga0103483_1002551	Not Available	871
Ga0103483_1005677	Not Available	578
Ga0103483_1006184	Not Available	551
Ga0103483_1006245	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	548
Ga0103483_1006315	Not Available	545

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103483_1001848	Ga0103483_10018481	F074917	MRFAETKRQKPTSFLTTKAKNKLDTIRQNPINQQKKQCGDRCHYKHSQCSSAGFTPRRPGNPVDFLTDLSNKLCGRHFSHRYLPIQVLINHDMTINTLRFSWVFDQANGQHLLRSILAIFTVKGW
Ga0103483_1002042	Ga0103483_10020422	F097453	LGASPWSSLNIKTYPVNYQGSKGSSTEYVLINVLPSSSRNYAYGVKKETTGLVAVKIFVKAGDGQGRLMAIANSLDTVLDNKTLSNGTKLGTSYLTVEGLDPANKSLYSASYIIPFTHYGE*
Ga0103483_1002551	Ga0103483_10025511	F020014	LDRKTVNIYPRNLIFFYDLGVYKDEPKPEYAPKMKSVNKPPAARPPIVATIQRGIRPISLISIVIKD*
Ga0103483_1003169	Ga0103483_10031691	F000237	KHLNVDQLTRFMVLHYFTP*YYLYLVQLHVMFCHES*DTDSGETTYEDKSGSYVS*FYDAFLKEIQDA*Y*VIFVFSYFFIHHFDGSTVNYFFFER*NISELDEIRFYGVAPH*YFRPLMGILTIAPTHYEGLMWFAL*LVLLASLPLLNTFYNPYNKYLSVIPTQNSVLQTIFFILFMMSLYCAANMLPCGRYYYEDEGGYVGNP*VKFSYQYGYLYLMWIVHHLDTLDHYIFQFNQTLKRKYIMKSAPERSVA*
Ga0103483_1003230	Ga0103483_10032301	F030453	NPPVSEFIAATKALVDVPLWYHYRVVSRYWLSLMGCFLFSVYMDNFVPSCAITGVFLINTRVGPDVMAMIQGLLAVVVGIVVNALMYSFSCRFGNTSVLQVVAVIYWLCTLTVGKGSSSLAGMGLLMAALSPFALYKFCTPDTPEAQAGMAIGLWGGIRALLIAVVITVISEFAHVPGLFTKLSRDSLQEGFEAMKTALKAVFPEGSAKGAVKAVDDALGAASGKVGDALSYNAACGMEPRLWMCPWKSQFVTETV
Ga0103483_1003809	Ga0103483_10038091	F000237	DTDSGETTYEDKSGSYIS*FYDAFLKEIQDAFY*TLYVFVYFFLHHFNGATVNYFFFER*NISELDEVRFYGVAPH*YFRPLMGILILAPTHYEGLM*MGLFFGLLSFMPVIYNCYNVFHKYVATIPMQNSLLQTSTFIFFMMSLYCTASMLPCGRYYYDPEGGYVGNP*VKLSYQFVYLYLGWIIHHLDLFDHYIFQFTQTLVRKCSSYNARTLKFNKGNISGSDAFEK*
Ga0103483_1005677	Ga0103483_10056771	F019484	LSFNNYFLTILGGSLKKIAKKITTRVPISRNVYTNASIF*
Ga0103483_1005699	Ga0103483_10056991	F085736	VYEDKSGSYIS*FYDAFLKEIQDA*Y*VNFVFLYFFYHHLTPATVSYYFFER*NISELDEIRFYAVAPH*YFRAFMGLLVVSPSHYEGLL*MGLFLALLATLPVIYNCYNSNNTYLPVIPMQSSLFQTLSFMFFMMSLYCVASMLPCGRYYYEPEGGYVGNP*VKFSYQYMYLYLG*FLHHLDLIESYPFQF
Ga0103483_1006184	Ga0103483_10061841	F021468	KYVCATFAAGVAADLPVIEVSLAGAAAEFNQMDKAREQMENRFIAQLQEKVSMMQKSSAPAVSKAISNILDVHTALFQTTKDHAAHSALLQAPTSLRVRVSENAADMLNEVAKHEAALNAREQELFNAALVSLDGVAPTSMLLESKNAGDQEFAVKVASGSSMSFLQSVQQLSERRAAKLREI
Ga0103483_1006245	Ga0103483_10062451	F007607	QLSACHSAAVDGVSCEIPNSQLFATGMNGDEDLGEDITMKGDKFHYVQKPAHAKLFATGMNGDEDLAEDITMKGDKFHYNQSLMQTGFATGMNGDEDLGQEITMKGQKFRYNQGQQQKLFAVGMNGDEDLGEDITMKGDKFHYVQRQ*
Ga0103483_1006315	Ga0103483_10063151	F009426	RAQNQVEFEKSKLTAAKVNKDVKLSLNMILGEISYTIIFFMTTSPCVISAGAARETLFEGKADYCMIVCE*
Ga0103483_1006689	Ga0103483_10066891	F063388	KSGGILDTIADMQAKAEDALASTRKDEMNAQHSFQMVKQGSEDETAVMKKQLAEATLSRSTTEEELHGAEAALTQEGKQLAADQTFLAELKQSCSAKASEWGVRQKQAADETAAIEKAKEILSEGVKVFLQTSTRMRTKNSEAAQDATRARAVRVLEGLKKQFRSYRLVQLAARAR
Ga0103483_1007340	Ga0103483_10073401	F000155	TLALIAAVAATKYDHMTEDELLVSLSNTLSSALESEARGDGDAAVAKTAAIKNIQKSLTARILKRLDDGQPLVEVARKMKAIEGMQP*