3300008790: Microbial communities from seawater in eastern North Pacific Ocean - P8 free-living

Overview

Basic Information

• IMG/M Taxon OID: 3300008790
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117963 | Gp0126284 | Ga0103695
• Sample Name: Microbial communities from seawater in eastern North Pacific Ocean - P8 free-living
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Georgia
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 8626253
• Sequencing Scaffolds: 1
• Novel Protein Genes: 1
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Microbial Communities From Seawater In Eastern North Pacific Ocean
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water → Microbial Communities From Seawater In Eastern North Pacific Ocean

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine biome → marine water body → sea water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: eastern North Pacific Ocean
• Coordinates
  • Lat. (^o): N/A
  • Long. (^o): N/A
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F022892	Metagenome / Metatranscriptome	212	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0103695_100624	Not Available	655

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103695_100624	Ga0103695_1006241	F022892	PLAKSIGVFKTILPPNIVAIQLKILIPVGTAIIIVAAVK*