3300008488: Wastewater microbial communities from the hospital sewers in Singapore - Hospital 1

Overview

Basic Information

• IMG/M Taxon OID: 3300008488
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0118183 | Gp0131407 | Ga0110937
• Sample Name: Wastewater microbial communities from the hospital sewers in Singapore - Hospital 1
• Sequencing Status: Permanent Draft
• Sequencing Center: Singapore Centre on Environmental Life Sciences Engineering (SCELSE)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 144015912
• Sequencing Scaffolds: 5
• Novel Protein Genes: 6
• Associated Families: 6

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Predicted Viral	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	1
Not Available	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Wastewater Microbial Communities From The Hospital Sewers
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From The Hospital Sewers

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Singapore
• Coordinates
  • Lat. (^o): 1.3
  • Long. (^o): 103.8
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F032312	Metagenome / Metatranscriptome	180	N
F044555	Metagenome / Metatranscriptome	154	N
F057196	Metagenome / Metatranscriptome	136	Y
F080163	Metagenome	115	N
F090333	Metagenome / Metatranscriptome	108	Y
F094005	Metagenome / Metatranscriptome	106	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0110937_1012319	All Organisms → Viruses → Predicted Viral	1332
Ga0110937_1064172	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	885
Ga0110937_1069324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	1287
Ga0110937_1089604	Not Available	534
Ga0110937_1157375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii	909

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0110937_1012319	Ga0110937_10123192	F094005	MKKEVIKLKEGNSVIYQDKTLMEKANVVSIDKKNGTAILSNKVIITRTTNLEGQFTRLDGKGNAIILPCTTENEQKYNAFVAYHQSKKSLEAIKKWLDDNGKHKDDETLEKVITLDKKLKKLIEKLHE*
Ga0110937_1012319	Ga0110937_10123193	F032312	MPKIKDYDEDLSAPKLLRERARDSKGRFIKKDLPPYLGAEQVLKPKNYYHFDSHGNYKGSSMNFDAMVCLGFTWFKLLVVALMMLLWPIVFIYALNDGIEGYPFKKYAIPYIFILVAWFIIFLYGLVS*
Ga0110937_1064172	Ga0110937_10641721	F090333	VPLDVMKAYFEQPSVNRYIANQQNYNLGNVVTEHYTKGKAEPAYYMQAGDDFYLISKTDPLKLTQVHNVPTLSGFGDFKVRVSTRSEFYEVQAEIKITKMPNSQFSLKPGTKKKNPFMV*
Ga0110937_1069324	Ga0110937_10693242	F080163	MKTIKFLQESFETKEKFQQEISFKYSYNRYTVESIDFRINQRNIRYFYEAMQNFENSLVDEFKEKKTNFCNAKQFLESINDFDKIIFVIITYMKTYFDFCKDYSKISLHVHLVQFDFTTSILIQGFYNYSHRDLSFSTKLESQVLDSENELLQEKLDLIREEICELIGVDPNLEKQGHEDNYVFNLNIESDNQIGFFLQATEL*
Ga0110937_1089604	Ga0110937_10896041	F057196	MTQNTLCKDKSQLRAETEDAVQKFLKAGGTIQVVKARKAPKQKMRAIGTRQVSTGSTGFATGYPRRSTFIAN*
Ga0110937_1157375	Ga0110937_11573753	F044555	MKTTNPSSRITISQNGNQILSCKVYKEPNYILSMSNEEILELISGLDYIGNLPTVPDLGKPIEIQVSTTRQIPLEQNKEVQTKIKEIIYNNLYDTLIDELKNTISRFQAQYNIQEINPYLQDILQNPEDLVSLTQHH