3300008213: Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius longissimus B BELIZE.1

Overview

Basic Information

• IMG/M Taxon OID: 3300008213
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0095504 | Gp0102455 | Ga0056110
• Sample Name: Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius longissimus B BELIZE.1
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 22186138
• Sequencing Scaffolds: 3
• Novel Protein Genes: 4
• Associated Families: 4

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	1
Not Available	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Cephalochordata → Leptocardii → Amphioxiformes → Branchiostomidae → Branchiostoma	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Marine Gutless Worms Symbiont Microbial Communities From Various Locations
• Type: Host-Associated
• Taxonomy: Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont → Marine Gutless Worms Symbiont Microbial Communities From Various Locations

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut

Location Information

• Location: Max Planck institute for Marine Microbiology, Germany
• Coordinates
  • Lat. (^o): 51.321602
  • Long. (^o): 12.394572
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000160	Metagenome	1850	Y
F006174	Metagenome	379	Y
F006210	Metagenome	378	Y
F032247	Metagenome / Metatranscriptome	180	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0056110_105427	All Organisms → cellular organisms → Bacteria	627
Ga0056110_106089	Not Available	570
Ga0056110_106486	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Cephalochordata → Leptocardii → Amphioxiformes → Branchiostomidae → Branchiostoma	542

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0056110_104257	Ga0056110_1042572	F000160	MKIGRFAFLRPDWGDLRATYDDHLRLIGKRVVDFLLALIELFSLGVTAEALRAIIG*
Ga0056110_105427	Ga0056110_1054272	F032247	MTVDDAIFNLETYGRHMGNRFIAINHDRHDALLLQNAVIVLESAGMIERDNDAKWSQCNVRIINKPVPKVDYTTGL*
Ga0056110_106089	Ga0056110_1060891	F006174	MHDGMPHDPIQGQRQGHESLKIRIPSIFKIYLLRHLQWELANDH*FLNYS
Ga0056110_106486	Ga0056110_1064861	F006210	VHHKSTPSTDNCRTDHRKEKTRAASIRNKSAITDHVCNENHVIDWENGKVIDRESDKAGRLMREAIWIRKTDNMNRDEGSYQLSHVWDKILHFDDWHRKSVMMKASDVKPKRR*