3300007743: Marine sponge Cinachyra sp. microbiome, Papua New Guinea CO2seep, Dobu 'bubble', cg4ads 200bp-25jan2016

Overview

Basic Information

• IMG/M Taxon OID: 3300007743
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124810 | Ga0105552
• Sample Name: Marine sponge Cinachyra sp. microbiome, Papua New Guinea CO2seep, Dobu 'bubble', cg4ads 200bp-25jan2016
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 76692163
• Sequencing Scaffolds: 11
• Novel Protein Genes: 11
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	11

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Cinachyra Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Dobu 'bubble' site, Papua New Guinea
• Coordinates
  • Lat. (^o): -9.73665
  • Long. (^o): 150.867667
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F065466	Metagenome	127	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0105552_1011694	Not Available	961
Ga0105552_1012251	Not Available	944
Ga0105552_1015835	Not Available	852
Ga0105552_1017897	Not Available	812
Ga0105552_1025954	Not Available	698
Ga0105552_1027176	Not Available	684
Ga0105552_1033067	Not Available	630
Ga0105552_1034912	Not Available	615
Ga0105552_1039932	Not Available	576
Ga0105552_1043231	Not Available	554
Ga0105552_1047077	Not Available	531

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0105552_1011694	Ga0105552_10116941	F065466	MKATVMSVLLCLLSALVEVHSQSVPYVSFKGANLPNHSYVDLTLVGSALDGSDSVQCHTDLDTCCNSDRGDWYFPNGARLQYNTDYSDIHESRTAQRVDLRHKNNAAPSGIYRCTIETNAVHSDDNSDTTTRETVYAGLY
Ga0105552_1012251	Ga0105552_10122511	F065466	MYNIYCLSPGTTMRATVMLLCLLFALAEVHSQTVPYVNFMGTILPNHSYVDLTLVRNLSNGSDSVQCHTDLDTCCNATQGTDRGDWYFPNGTRLNFTGGPGDIYEQRVAKRVDLRRRNNASTSGIHRCTVETNAVHNDSGWETVYAGLYASGG*
Ga0105552_1015835	Ga0105552_10158351	F065466	IILSPGTTMKATVMSVLLCLLSALVEVNSQTVPYVSFKGTNLTNHSYVDLTLVGDARDGNDGVQCHTDLVTCCSDPQGADRGDWYLPNGSRLELNNGFIDIFEVRIAQRVDLRRRNNGDTSGIYRCTVETNAVNNVRGRETVYVGLYASGGECTHMCI*
Ga0105552_1017897	Ga0105552_10178971	F065466	MPSSGATMRVTVMNVLLCLLSALVEAHSQTVPYVSFMDTNLPNHSYVDLTLVGMAKDKHDSVQCHTDLITCCSHTLGDDRGDWYFPNGTKLQFNDDGGSIYEFRRKQVVDLRRKNNGDTSGIYCCTVETNAVHSYDDSDTTARETVYAGLYASGGECLQFYLKYIVCL*
Ga0105552_1025954	Ga0105552_10259541	F065466	VLLCLLSALVEVHSQTVPYVSFMGTNLPNHSYVNLTLVGRPEDGGDSVQCHTDLSTCCSGAQGTDRGDWYFPNENRLQFSNGPDDIYEERGAQRVDLRRRNNGDTSGIYRCDIETNAVHNESGHETVYAGLYASGGECTHM*
Ga0105552_1027176	Ga0105552_10271761	F065466	VNSQTVPYVSFMGSNLPNHSYVNLTLVGDAEDGSDSIQCHTDLVTCCSSTEGADRGDWYFPNANRLNFQGGPGDIYQYRGAQRVVLRHRNNGSTSGIYCCTVETNAVHSGNESDKTTRETVYAGLYASGGECTHMCI*
Ga0105552_1033067	Ga0105552_10330672	F065466	MKATVMSVLLCLLSALVEVHSQTVPHVRFMGTNLTNYSFVNLTLVGNNRNGNDSVQCHSDLETCCNATSGPDRGDWYFPNGMRLNFNMNPGDLYEVRRATQRVDLSRRNDGDTSGIYCC
Ga0105552_1034912	Ga0105552_10349122	F065466	FTGVFVRFLGVDLSNHSYVDLTLVGRAEGGGDSVQCHTDLSTCCSGAQGADRGDWYYPNGSRLQFSSNPGDIYEHHEAQRVDLHRRNNGDTSGIYRCTVETNAVHSNDDSDTTTWETVYAGLYASGGEEATRTAI*
Ga0105552_1039932	Ga0105552_10399321	F065466	MVTGPIYICSSPGAFVSFMGTNLPNHSYVDLTLVGSNVDGSDSVHCHTDLDTCCSKAQGVDRGDWYFPNTERLNFLGDPGDIHEWRGAQLVDLRRKNNSDTSGIYCCTIETNAVHSDDIIDITTRETVYAGLYASGGECAHGEEF
Ga0105552_1043231	Ga0105552_10432311	F065466	MSVLLCLLSALVEVHSQTVPFVRFVGTNLPNHSYVDLTLVVGRPEDGGDSVECHTDLSTCCNDNVGADRGDWYFPNGSRLQYRNGPGDIYEFRGAQRVDLHRRNNADTSGIYHCTIETNAVHSNDSSDTTTRETVYAGLYTSGGECVCVC
Ga0105552_1047077	Ga0105552_10470771	F065466	MYFIGSFVRFLGVNISNHSYVNLTAVGNARNGSDNVQCRTDLSTCCSVAQGTDRGDWYFPNGNRLNFNGDGGDIYEVRGAQQVDLRRRNNGDASGIYRCTVETNAVNDDDGRETVYVGLYASGGEKKMKCSST*