3300007602: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_B6L_H (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300007602
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123874 | Ga0099787
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_B6L_H (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 74362704
• Sequencing Scaffolds: 5
• Novel Protein Genes: 6
• Associated Families: 6

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	5

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Austria: Klosterneuburg
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000344	Metagenome / Metatranscriptome	1257	Y
F001758	Metagenome / Metatranscriptome	640	Y
F017318	Metagenome / Metatranscriptome	241	Y
F025291	Metagenome / Metatranscriptome	202	N
F037756	Metagenome / Metatranscriptome	167	Y
F070166	Metatranscriptome	123	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0099787_1002912	Not Available	1098
Ga0099787_1020378	Not Available	798
Ga0099787_1174679	Not Available	554
Ga0099787_1226840	Not Available	739
Ga0099787_1230954	Not Available	569

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099787_1002912	Ga0099787_10029122	F070166	PVPVPNVVLSGVVMNLDNYVVQIHKRTKRITLQRFLISKIAYGEDFSLIELAALFHNQLWLQTKCQVDPHFKVKFGMTLEVIASFLKECNFSRGLQPATISRMKAKALTLEGDFLIPKRNLPNLEAQLRNSISTKWRKPEGVEVSKLPPKQHVGKGYRDHGTAQKPEIDGSPSWQEVGSEFGNLERESTELILKLLKIIEGTSNDSITEQVKQIQRTVAVHEAIKRIHPNWRNTEIAEASEGKIRLKFKAEK*
Ga0099787_1020378	Ga0099787_10203781	F000344	MRPRHPHAAESGVGKHTARESERVQACAAGKERVTNAHPHKL
Ga0099787_1050618	Ga0099787_10506181	F001758	VTGEKSGQVGWRDSSQAGAQVPGVEAEFTSSSGDVRASSVYAKKELGDEER*
Ga0099787_1174679	Ga0099787_11746791	F025291	HSSTGLYTLNVGADQRYMSFQTLLTTDEFQNMSIVYNEFKIHKAVFTSLPTTNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSARIFAPKATTAQSCEWNLKGLGPNFGIWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK*
Ga0099787_1226840	Ga0099787_12268401	F037756	VPTLGAHLAAAAGFPTPFSAANGVSGLVAGPSNLSRG*
Ga0099787_1230954	Ga0099787_12309541	F017318	DFTNLFDMYRIDKIEVAWYPEYTVLSDSGLVSNAVDVQVNTAIAQISNTPTVVSDVLQYKTCVGTGITQIHKRSFQPSYLMDGICPCSCFLSCNNATANWYGVAYGVAPTGTAMLFKSRAKFFMSFVQSR*