3300007588: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_D4R_HD (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300007588
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123882 | Ga0099778
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_D4R_HD (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 40765399
• Sequencing Scaffolds: 4
• Novel Protein Genes: 5
• Associated Families: 4

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	3
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Austria: Klosterneuburg
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001758	Metagenome / Metatranscriptome	640	Y
F033443	Metagenome / Metatranscriptome	177	Y
F051952	Metatranscriptome	143	N
F070166	Metatranscriptome	123	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0099778_1005556	Not Available	851
Ga0099778_1017260	Not Available	538
Ga0099778_1040922	Not Available	536
Ga0099778_1091867	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	833

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099778_1005556	Ga0099778_10055561	F070166	PVPVPNVVLSGVVMNLDNYVVQIHKRTKRITLQRFLISKIAYGEDFSLIELAALFHNQLWLQTKCQVDPHFKVKFGMTLEVIASFLKECNFSRGLQPATISRMKAKALTLEGDFLIPKRNLPNLEAQLRNSISTRWRKPEGVEVSKLPPKQHVGKGYRDHGTAQKPEIDGSPSWQEVGSEFGNLERESTELILKLLKIIEGTSNDSITEQVKQIQRTVAVHEAIKRIHPNWRNTEIAEASEGKIRMKF*
Ga0099778_1011768	Ga0099778_10117681	F001758	QVTGERSGQAGWRDSSQAGAQVPGAEAEFTSSSGDVRASSVYAKKELGDEER*
Ga0099778_1017260	Ga0099778_10172601	F051952	ETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLEDVVSANPQDRLIRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN*
Ga0099778_1040922	Ga0099778_10409221	F051952	FTSTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEIVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRSIFTSLEDVVSANPQDRLIRMREVFGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFPPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTSD
Ga0099778_1091867	Ga0099778_10918671	F033443	SKYQLLYELKNLYSVLNSKNQGELYRQPINVLLQTINLDTDEDRMSKVLNELAIYDWVPEIKLFVYNLTKSPEQRSNLLSGGKSEVVYTIVEQVEDGHLAYIKDSWFLLTDDSIEKTLLENHVKDDNRMKTLRSLQTAMQFATINESRIDFRISEYLTIGLSVNDSTIFINEDELSEDTSLENLFSSPIVPIVNRNFYPLLVEVSNNIDSFVELDVVKRVSNLISPTLEVFAFNYKKNTFIYRCDERYGNSFFKYESALELVNEVRNELNYDLTFFY